Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1926 ATGAAAATGAACCTTTGTCCTGAAACTGAAAGTGTCTCACCCCAGAAGAAGAGAGCAATAATGGAAGAGCTTGTTAAGGGTCAGGAAGCTGCTACTCAACTCAGAGTTCTGCTTCATAACCCCTTTGAGACTGATCTCTCTCTCTCTTCGCATCACCTCATAGCCAAGGTGCTCACATCTTTCACACAAGCTCTTTCTGTTATCAACTCTTCTCCTTTGCTACCTGGTTCTGCAGATGGGCTGGGTTATCAGAATCTCCTGCTTTCCGGCGAAAATGGGTGGTCTGTGCCCCGTTCCAGCAACTGTCCAACATCTGGAGATTGCAGTGAGAAGAGATCGCAAAAGGGTGGAAGAGGTCGCTACAGTAGAAGAAAGAGTGCACTCACATGGACTAAACTATCTTGCACTACTGATGACAATCATGCATGGAGGAAGTATGGACAAAAGGAAATAGTGAATTCTCAATTCCCTAGGAGTTACTTCAGGTGCAGTCATAAGTATGACCAAGGTTGCCAAGCAACAAAACAAGTGCAGAGGAATCAAGAATGTCCAACGATGTACCAAACTACTTACACTGGCATTCACACATGCTCTAAGGCTACACACTCAACCACAGATTCTTCCAATTGGGAATCTTATCTTCTGAATTCTGATCATGACTCTATTCTACAGGATCCCCCCATTAGCTCACCAACCTTAACTATAAAACAAGAATTTCTCAAAGATCTTACAGATCACAAGCCATTGGAGCCTAGTCTGCTTCAGATTTGA 771 0.4384 MKMNLCPETESVSPQKKRAIMEELVKGQEAATQLRVLLHNPFETDLSLSSHHLIAKVLTSFTQALSVINSSPLLPGSADGLGYQNLLLSGENGWSVPRSSNCPTSGDCSEKRSQKGGRGRYSRRKSALTWTKLSCTTDDNHAWRKYGQKEIVNSQFPRSYFRCSHKYDQGCQATKQVQRNQECPTMYQTTYTGIHTCSKATHSTTDSSNWESYLLNSDHDSILQDPPISSPTLTIKQEFLKDLTDHKPLEPSLLQI* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1926 256 Pfam WRKY DNA -binding domain 138 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g1926 256 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 4 245 IPR044810 GO:0003700
Pvu8g1926 256 ProSiteProfiles WRKY domain profile. 138 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g1926 256 SUPERFAMILY WRKY DNA-binding domain 135 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g1926 256 SMART WRKY_cls 137 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g1926 256 MobiDBLite consensus disorder prediction 97 123 - -
Pvu8g1926 256 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 4 245 - -
Pvu8g1926 256 Gene3D WRKY domain 122 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1926 Pvu-Chr8 48910744 48918666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1926 16 221 WRKY Transcription Factor Family AT3G56400 39.336 1.31e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu8g1926 WRKY 4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1926 - - gmx:100796071 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1926 8 48910744 48918666 Pvu8g1926 8 48910744 48918666 ECH
Pvu8g1926 8 48910744 48918666 Pvu9g0448 9 8430030 8432516 PCT