Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1925 ATGAAAAACATGATTTGTACTGAAACTGATGCAAAGAAGAAGAGAGAGATAATGAAAAATATTGTTAAGGGTAAAGAAGCTGCTACTGAGCTAAAGATTCTGCTTCAGAAACCCTCTGGGAGTGAACCCTCTCTCTCTTATCACCAACTCATGGCCATTGTTCTCACATCTTTCACACAATCTCTTTCTATCATTTCTTCAGAACCCAGTTCAGCAGATGTGGTGGCTTGTCTGAATTCCACCCAATATGGGTCGCCGGTGACCGGTTCCGGCATTGATCCAACGTCTCCACATTGCAGTGAGAAGAGATCCCAAAAGGGTGGGAGAGGTCGCTACAATAGAAGCAAGGGTGTACTGAGAAAGACCATAGTCTCTTGCACCACTGATGATAATTATGCATGGAGGAAGTATGGGCAAAAGGAAATCCAGAATTCTGAATTTCCTAGGAGTTACTTCAGGTGCAGTTACAAGAATGATCAGGGTTGTAAAGCAACCAAACAGGTGCAACTGGATCATGATAATCCACATATGTATCGAATTACGTACATTGGTATTCACACATGCAATGTCATTCCTATGGTTCCACACACAACCACAGATTCTTCCTCTTGGGAATCATATCATCTGCATTCTGATCGTGACTCCAATGCACAAGATCATCTCATTAGCTCACCACACTTAGCTATAAAACCAGAATTTAGCAAAGAAATTCACACACCAAGTGATCTTACTGATCACAATATGTTTCTTGAATATTGGAAGGAATCTGAAGCATCCAACTCTACCATTATGCCCTTAAGGAAGGCACCTGATAACAACGCAGATAATGTGTATTCATGTACAGACTCTCATAACTTGGACATGGATTTTGGTGAGGTGGCATCTGTTCTTCTTTATCCTCACTTTCACTTTGACCAAGATAAGTTCTTTTAG 933 0.4105 MKNMICTETDAKKKREIMKNIVKGKEAATELKILLQKPSGSEPSLSYHQLMAIVLTSFTQSLSIISSEPSSADVVACLNSTQYGSPVTGSGIDPTSPHCSEKRSQKGGRGRYNRSKGVLRKTIVSCTTDDNYAWRKYGQKEIQNSEFPRSYFRCSYKNDQGCKATKQVQLDHDNPHMYRITYIGIHTCNVIPMVPHTTTDSSSWESYHLHSDRDSNAQDHLISSPHLAIKPEFSKEIHTPSDLTDHNMFLEYWKESEASNSTIMPLRKAPDNNADNVYSCTDSHNLDMDFGEVASVLLYPHFHFDQDKFF* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1925 310 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 292 IPR044810 GO:0003700
Pvu8g1925 310 Gene3D WRKY domain 114 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g1925 310 ProSiteProfiles WRKY domain profile. 129 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g1925 310 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g1925 310 Pfam WRKY DNA -binding domain 129 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g1925 310 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 10 292 - -
Pvu8g1925 310 SUPERFAMILY WRKY DNA-binding domain 125 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g1925 310 MobiDBLite consensus disorder prediction 88 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1925 Pvu-Chr8 48904565 48906193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1925 8 199 WRKY Transcription Factor Family AT3G56400 39.691 1.20e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu8g1925 WRKY 6.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1925 - - gmx:100796071 303.908