Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1921 ATGCCGAATCCCGAGGCTAACCGCAGCCAACAGTCACGCTCCCGGGGCCGTCCCTCCACGTCGGCGCCGCCGCGGACCCCGGCCCGGGCCTCGCTGCGCCAGCTACTGCGCGTGGCGTCAGTGGCGAGCGGTATTCAGTTCGGTTGGGCCTTGCAGCTATCCCTCCTCACTCCCTACGTCCAGCAGCTCGGCATCCCTCACCAATGGGCCAGCATCATCTGGCTCTGTGGCCCCGTCTCCGGCCTCTTCGTCCAGCCTCTCGTCGGCCACTTGAGCGACCGCTGCACCAGCCGCTTCGGCCGTCGCCGCCCCTTCATCTTCATCGGCGCCATCGCCATCGTCATCGCCGTCATCATCATCGGCTACGCCGCCGACATCGGCTGGCTCCTAGGCGACACCGATTCCTACCGACCTGCCGCCATAACTGTCTTCATAATTGGCTTTTGGATCCTCGACGTCGCCAACAACGTAACGCAAGGTCCCTGTCGAGCCTTGCTCAGTGATCTCACCAGAAAGGATCCTCGAAGGACACGCGTTGCAAATGCTTATTACTCACTGTTTATGGCCATTGGTAATATTCTTGGCTATGCAACTGGATCATACAGTGGTTGGTACAAGATTTTTTCTTTTACACTTTCCCCTGCTTGCACAATTAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTTGACATTGGTTTCATTGCGGTCACAACATATATCAGCATCATGGCAGCTCATGAAGTGCCTCTAAATTCTAATGAGGTAGTCCATGCTGAAGCTGGGGCCGAGGAGTCAGGTAGTGCCGAAGAAGCTTTCATGTGGGAATTATTTGGGACATTAAAATATTTTTCAACCCCTGTGTGGATAATTCTGTCTGTTACTGCTCTCACATGGATTGGGTGGTTTCCATTTACTCTATTTGATACTGATTGGATGGGTCGAGAGATTTATGGTGGTAATCCAAATCAAGGCCTTACTTATGATGCTGGAGTTAGAATGGGAGCACTTGGTTTGTTGCTTAATTCAGTTGTTCTTGCATTAACATCATTGCTCATGGAAAGGTTATGCAGGAAGAGGGGGGCTGGTTTTGTGTGGGGAATCTCAAATCTCGTGATGACATTTTGCTTTCTTGCAATGTTAGTATTAACCTATGTGGCAAGTAACATAGGCTATGCAGGCAAAGATCTACCTCCACCTGGCATTGTGATAGCTGCGTTGATTATCTTTACCATTCTTGGGTTTCCACTGGCAATCACTTACAGTGTTCCGTATGCCTTAATTTCCACACATATTGAGTCTTTGGGACTTGGCCAAGGGTTATCAATGGGTGTCCTGAATCTGGCAATAGTGGTCCCACAGATAATAGTGTCACTGGGAGCTGGACCATGGGATCAGCTATTTGGTGGAGGAAACTCCCCAGCCTTTGCTGTGGGAGCTGTTTCAACCATTATCAGTGGACTTATAGCAATCTTGGCTATTCCTCGATCTGGTGCTCAAAAGGCTCGAAGCCATGCGTGA 1518 0.5059 MPNPEANRSQQSRSRGRPSTSAPPRTPARASLRQLLRVASVASGIQFGWALQLSLLTPYVQQLGIPHQWASIIWLCGPVSGLFVQPLVGHLSDRCTSRFGRRRPFIFIGAIAIVIAVIIIGYAADIGWLLGDTDSYRPAAITVFIIGFWILDVANNVTQGPCRALLSDLTRKDPRRTRVANAYYSLFMAIGNILGYATGSYSGWYKIFSFTLSPACTISCANLKSAFFLDIGFIAVTTYISIMAAHEVPLNSNEVVHAEAGAEESGSAEEAFMWELFGTLKYFSTPVWIILSVTALTWIGWFPFTLFDTDWMGREIYGGNPNQGLTYDAGVRMGALGLLLNSVVLALTSLLMERLCRKRGAGFVWGISNLVMTFCFLAMLVLTYVASNIGYAGKDLPPPGIVIAALIIFTILGFPLAITYSVPYALISTHIESLGLGQGLSMGVLNLAIVVPQIIVSLGAGPWDQLFGGGNSPAFAVGAVSTIISGLIAILAIPRSGAQKARSHA* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1921 505 PANTHER SUGAR TRANSPORTER 10 503 - -
Pvu8g1921 505 Gene3D MFS general substrate transporter like domains 28 492 IPR036259 -
Pvu8g1921 505 SUPERFAMILY MFS general substrate transporter 33 497 IPR036259 -
Pvu8g1921 505 CDD MFS_SLC45_SUC 35 491 - -
Pvu8g1921 505 TIGRFAM GPH_sucrose: sucrose/H+ symporter 31 496 IPR005989 GO:0005887|GO:0008515|GO:0015770
Pvu8g1921 505 MobiDBLite consensus disorder prediction 1 27 - -
Pvu8g1921 505 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 10 503 - -
Pvu8g1921 505 Pfam MFS/sugar transport protein 50 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1921 Pvu-Chr8 48856113 48865535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1921 5 500 Sucrose Transporter Gene Family AT1G09960 68.577 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1921 K15378 - gmx:100820483 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1921 8 48856113 48865535 Pvu8g1921 8 48856113 48865535 ECH