Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1913 ATGGATTCCCGCGACTCCTCCCCTCGATCCCGCGACCCCGACGCCGACAACCACCACCACTCCTTCGACGATCCCCCGCCCTCCCTCCACTCCAAGGTCAAGCTCATGTGCAGCTACGGCGGCCGAATCCAGCCCCGCCCCCACGACAACCACCTCACCTACGTCGCCGGCGACACCAAGATCCTCACCGTAGACCGCCACATCAAGCTCCCCGCCCTCCTCACCAAACTCTCCTCCCTCGCCAACGCCCCCGCCAACGCCACCTTCTTCAAGTACCAGCTCCCTGGCGAGGACCTCGACGCCCTCATCTCCGTCACCAACGACGAAGACCTCCACCACATGATGCTCGAGTACGATCGCCTCTCCCGCGCCTCGCCTAGACCCGCACGCCTGCGCCTCTTTCTGTTCCCGCTCCACAACAATAACAGCAACATCAATTTCGCGCTCACCGATTCCAAACCCGAGCGCCAGTGGTTCGTCGACGCTCTCAACTCCGTTCAGGTTCCGCTTCTCGAAGGTTCTCCTCCGCCGCCTACGGCAGCGCCGAATCCGGATTTTCTCTTCGGATTAGATAAGCCGCCGCCGGCTCCCGAGGCTCCGCCGAAGACTCCTTCCCCGGAATCGGAATGCTTCTCCGAGGATCGTCCGGCGGTCAGAGATACCGAAACCGAAACCGGAACCGGAACCGAACGCGTGCTCGAACCTGAGATTCGGAGGCTGCAGATTGGTAACAATAATGAGCAACTATTGCAACGGAAGATGAAACTAGAGGAAGATAATAACGGTAGGGTTAACGGCGCGGAAGGTTTCTCTCAGACGAACACGGAGAATGTGACGCCGTTAGTTAGTCAAGGTTTTCACTCTGGAACGGTGTCGTTTTTGCAGGAGAGGAATAATGTGGGTTATTCGTTCGCGGTTCCTACGACCGGGAGTCAGATTTATCTCATTCAGACGCCTTCTGGAATTTTCCAAGCAGTTCGGCCTGTGACTGGACCGGTGGGGCAACCGGTTTATCTGGTTCCGGCGCCTAGTTCGGTTGGTGTGGCGGCGGAGCGTGGATATTCTGCGGGACAGGGAGGAGCGCGGTGGTGA 1092 0.5897 MDSRDSSPRSRDPDADNHHHSFDDPPPSLHSKVKLMCSYGGRIQPRPHDNHLTYVAGDTKILTVDRHIKLPALLTKLSSLANAPANATFFKYQLPGEDLDALISVTNDEDLHHMMLEYDRLSRASPRPARLRLFLFPLHNNNSNINFALTDSKPERQWFVDALNSVQVPLLEGSPPPPTAAPNPDFLFGLDKPPPAPEAPPKTPSPESECFSEDRPAVRDTETETGTGTERVLEPEIRRLQIGNNNEQLLQRKMKLEEDNNGRVNGAEGFSQTNTENVTPLVSQGFHSGTVSFLQERNNVGYSFAVPTTGSQIYLIQTPSGIFQAVRPVTGPVGQPVYLVPAPSSVGVAAERGYSAGQGGARW* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1913 363 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 2 338 - -
Pvu8g1913 363 MobiDBLite consensus disorder prediction 170 234 - -
Pvu8g1913 363 Gene3D - 53 137 - -
Pvu8g1913 363 SMART PB1_new 47 138 IPR000270 GO:0005515
Pvu8g1913 363 Coils Coil 239 259 - -
Pvu8g1913 363 CDD PB1_UP2 36 136 - -
Pvu8g1913 363 MobiDBLite consensus disorder prediction 171 204 - -
Pvu8g1913 363 SUPERFAMILY CAD & PB1 domains 48 142 - -
Pvu8g1913 363 PANTHER OS05G0427100 PROTEIN-RELATED 2 338 - -
Pvu8g1913 363 MobiDBLite consensus disorder prediction 208 234 - -
Pvu8g1913 363 Pfam PB1 domain 49 137 IPR000270 GO:0005515
Pvu8g1913 363 MobiDBLite consensus disorder prediction 1 27 - -
Pvu8g1913 363 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1913 Pvu-Chr8 48618475 48620046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1913 32 174 MAP Kinase Kinase Kinase AT5G57610 41.667 3.68e-27 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1913 8 48618475 48620046 Pvu8g1913 8 48618475 48620046 ECH