Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1894 ATGCCTCACAGAGCGACTTACTTTTTCCCGAGGCAATTCCCGGAAAGAGGGTTGGATGAGTCTTCCAAGCAGAGATTGGATCACGAGAAGAGAAAAATTGTCAACTCAATCAAATCATCGGATACGACTTTTTCCTATGAAAGCGACGCGCCCATAAAGCCAACACCGATTCCCACGCCTGCCGCCAAAGACAACCACGACGTCGTTTTCTCATCCGGTAAGCAATCCGCGGTATCCGACCTCTTCACCGGCGCCGACAAGTTCCGCACCAAGCAGAAGCAAATCGCCGCCTTCTGCGATTGGTTGATCGACAAAAAGAAGGACCGCAATCGACCGAGTCACCATTTAAAGTCCTATCCCAACGACGACGACGAAGAAGAAGATGAACGAGAGCTTCTACTTCCGACGCCGCCGCCTCCGGCGGTGGCTGCAGCGGCGCAAGTGGTGAAGGATGCCGTTGACCGGAGCTTCGACCGGCAGGTTTCTTTGCCGAGGTTGTCCAGCGGGAGCAGCTACGCCGGGAGCTTGTTCACGCTGGACGGCACCGCCACATTCTCCAGCGACGTTACGAAAGACGAAACGTCGTCGTTTCAAGTCTTCACTGAAGAAGACGCGAGAAAAAGGAAAGAAGAAGAGGAAGAAAACGTAAAACGCAATACCGCGCAGAAGTATAAGGAGAGCTACTACCTGCAACTGGCGTTGGCGCAGAGACTCTCTTGTTTAGCAAGCCTCGCTTCTGAACCTGTTGTCACACTCGACGCTGGTCCCGAAACCTGGGACGCTGAATCCGTTTCGTATCGTTTATGGGTGAGTGGGTGTTTGTCGTACACGGACAAGATATCTGACGGTTTTTACAACATATTGGGGATGAATCCGTACCTTTGGGTGATGTGCAATGATGTGGAAGAAGAAGGGAAGCGGTTACCGACTCTGATGGCGCTTAAGGCGGTTGAACCGAGCGACACTTCCATAGAGGTGGTTCTTTTCGATAGACAGGAGGACTCTCGGCTTAAGGAGCTTCAAGATAAAGCTCAGGAGTTGTATTCTGCTTCGGAAAACGCGTTGGTGCTGGTGGAGAAACTCGGAAAACTCGTTGCTATATGCATGGGGGGTACGTTCCCTGTGGAGCAAGGAGATCTACACAAGCGGTGGAAGTTGGTTAGTAAGAGGTTGAGGAACTTTCACCAATGTTTTGTGCTTCCTGTTGGTAGCTTATCCAGTGGACTCTGTAGGCATCGCGCGATTCTCTTCAAGAGATTGGCAGATTACATAGGTTTGCCATGTCGCATTGCTCGAGGTTGTAGGTACTGTGTTTCAGATCATAGATCGTCTTGCCTTGTCAAGATTAAAGATGACAGACAGCTCTCAAGAGAATATGTAGTTGATCTGGTTGGGGAACCAGGAAATATCCTTGGGCCAGATTCCTCAATTAACGGAGCATATGCCTCATCAATACCTTCCCCGTTTCAAATTTCTCATTTAAAAGAATCCCAATCTCCATATGTGGATGTTACAGCATGTTCTCAATCTCTTGATAACTCTTATTCAGGCTGTGTACACGAAGATCAACGAGTTGAAGAAACTGATCGACTGAAAAATAGTAATGGCTCTATTTATGCTGCAATAGATCAAACTCGTGGAGGTACAGAACAACCTCTATTTCCCTGTGGCTTGAAAGGGAATGATGAGGAATGTGCTGTTCTGGGTTTATTAAAGTTTCCTGCCATCTATGAAGGTGTTTCTGATGATCTTGACCAAGTCTCTGGAGCATCGATACATGAGTACCCAAGGCTCAGAAAAGATTCAGTTGTAGTTATGGAAGCTTCCAAAGAGATCGTTGTAAAGGGAAGTTCGGGGCTAAAAAGTATCTATAAGCAATCTATACTGAGCTCATCCACCGAATCAGAAAAGGAACACGTAAAAAATAAACATGAAAATCAGGGTGCTGGTAATATTCCAAGATACTTGAACCTTGAACCATCACTTGCAATGGACTGGCTTGAGATACCGTGGGACGATTTACGAATCAAAGAGCGTGTTGGTGCTGGATCATTTGGGACAGTGTACCGTGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTTTAACAGTTCAGGATTTCCAGGATGATCAGTTGAAAGAATTTCTCAGAGAGGTTGCCATAATGAAACGAGTACGTCATCCAAATGTGGTGCTTTTCATGGGTGCAGTTACTAAACGTCCACATCTATCTATAGTAACAGAATATTTGCCTAGGGGCAGTTTATTCCGCCTAATACATAAGCCAGCATCTGGTGAAATTCTAGATCCAAGGAGAAGGTTACGGATGGCTTTAGACGTGGCTAAAGGGATCAATTATCTCCACTGTCTGAAGCCTCCAATTGTGCACTGGGATCTCAAAACCCCGAACTTGTTAGTGGACAGAAATTGGACTGTCAAGGTGTGTGATTTTGGATTGTCCAGATTTAAGGCGAACACTTTCTTATCATCAAAATCTGTCGCTGGAACTCCTGAGTGGATGGCTCCAGAATTTCTTCGTGGCGAACCTTCAAATGAGAAGTCTGATGTTTACAGTTTTGGGGTTATCCTGTGGGAACTTGTGACCCTGCAACAACCGTGGAATGGACTTAGTCATGCCCAGGTAGTGGGAGCTGTGGCCTTCCAGAATAGGAGGCTTGCTATCCCTCCAAACATTTCCCCAGCGTTGGCCTCTCTGATGGAATCTTGTTGGGCTGATAAACCTGGTGATCGCCCATCATTTTCAAGCATAGTTGAATCTCTAAAGAAACTACTCAAGTCACCAGCGGATGCGATTAAAATGGGTGGGAAATAA 2835 0.4677 MPHRATYFFPRQFPERGLDESSKQRLDHEKRKIVNSIKSSDTTFSYESDAPIKPTPIPTPAAKDNHDVVFSSGKQSAVSDLFTGADKFRTKQKQIAAFCDWLIDKKKDRNRPSHHLKSYPNDDDEEEDERELLLPTPPPPAVAAAAQVVKDAVDRSFDRQVSLPRLSSGSSYAGSLFTLDGTATFSSDVTKDETSSFQVFTEEDARKRKEEEEENVKRNTAQKYKESYYLQLALAQRLSCLASLASEPVVTLDAGPETWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNDVEEEGKRLPTLMALKAVEPSDTSIEVVLFDRQEDSRLKELQDKAQELYSASENALVLVEKLGKLVAICMGGTFPVEQGDLHKRWKLVSKRLRNFHQCFVLPVGSLSSGLCRHRAILFKRLADYIGLPCRIARGCRYCVSDHRSSCLVKIKDDRQLSREYVVDLVGEPGNILGPDSSINGAYASSIPSPFQISHLKESQSPYVDVTACSQSLDNSYSGCVHEDQRVEETDRLKNSNGSIYAAIDQTRGGTEQPLFPCGLKGNDEECAVLGLLKFPAIYEGVSDDLDQVSGASIHEYPRLRKDSVVVMEASKEIVVKGSSGLKSIYKQSILSSSTESEKEHVKNKHENQGAGNIPRYLNLEPSLAMDWLEIPWDDLRIKERVGAGSFGTVYRAEWHGSDVAVKVLTVQDFQDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHKPASGEILDPRRRLRMALDVAKGINYLHCLKPPIVHWDLKTPNLLVDRNWTVKVCDFGLSRFKANTFLSSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTLQQPWNGLSHAQVVGAVAFQNRRLAIPPNISPALASLMESCWADKPGDRPSFSSIVESLKKLLKSPADAIKMGGK* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1894 944 Pfam Ethylene-responsive protein kinase Le-CTR1 261 470 - -
Pvu8g1894 944 MobiDBLite consensus disorder prediction 110 141 - -
Pvu8g1894 944 Pfam Protein tyrosine and serine/threonine kinase 674 928 IPR001245 GO:0004672|GO:0006468
Pvu8g1894 944 PRINTS Tyrosine kinase catalytic domain signature 748 761 IPR001245 GO:0004672|GO:0006468
Pvu8g1894 944 PRINTS Tyrosine kinase catalytic domain signature 789 807 IPR001245 GO:0004672|GO:0006468
Pvu8g1894 944 PRINTS Tyrosine kinase catalytic domain signature 855 877 IPR001245 GO:0004672|GO:0006468
Pvu8g1894 944 PRINTS Tyrosine kinase catalytic domain signature 899 921 IPR001245 GO:0004672|GO:0006468
Pvu8g1894 944 Gene3D Transferase(Phosphotransferase) domain 1 753 940 - -
Pvu8g1894 944 Coils Coil 202 222 - -
Pvu8g1894 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Pvu8g1894 944 SUPERFAMILY Protein kinase-like (PK-like) 653 927 IPR011009 -
Pvu8g1894 944 ProSiteProfiles Protein kinase domain profile. 674 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1894 944 Gene3D Phosphorylase Kinase; domain 1 667 751 - -
Pvu8g1894 944 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 105 943 - -
Pvu8g1894 944 SMART serkin_6 674 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1894 944 CDD STKc_MAP3K-like 680 928 - -
Pvu8g1894 944 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 105 943 - -
Pvu8g1894 944 ProSitePatterns Protein kinases ATP-binding region signature. 680 701 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1894 Pvu-Chr8 48241941 48248025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1894 1 943 MAP Kinase Kinase Kinase AT4G24480 56.623 0.0 1040
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pvu8g1894 PK_Tyr_Ser-Thr 9.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1894 - - gmx:100786546 1630.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1894 8 48241941 48248025 Pvu9g0371 9 7621800 7629362 PCT