Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1890 ATGAGCGGAGAAGAGAGCAAGGGTTCTGCTTTTCTGGGAACCAACACCCCTTATTCAGGTTTTCTTCTTGACCCTGCAAAATGGGGTGTGCTGAGTTTGCCTGAAAAACAAAGACTAGTCCATGAGATTGCTCGACAGTCAAAAGATGCCTCTAATTTGCTTCAGACATTTACACGCAGGGAACTTCTAGAAATAATCTGTGCTGAATTAGGCAAAGAGAGGAAGTACACAGGCTATACCAAGAGTCAAATGATAGAACATCTTCTGAAGATAATTTCTAAGAACTCTAACTTGCATGTCATCGGAAATATGCCTGCTCCTACCAGAAGTTGCATTGGATCTAAAAGGAAAAAGAAACCTGCATCTGAGGATTTACAACAAGCTCCTCTAGAGAACATTAAAGAGGAAATAGTAAAAACCTTTTTGTGTCAAAATGTTGCATGCAAAGCTACATTGAATCCAGAAGATTCTTTTTGCAAGAGATGTTCTTGTTGCATATGTCATTGCTATGATGATAACAAGGATCCTAGTTTGTGGTTGACCTGCAGCTCCGATCTTCCCAATGAAGAGTCATGTGGAATGTCCTGTCATTTGCAATGTGCTTTGAGTAATCAAATGTCTGGCATTTTGAAGGGTAGTTGTGGTATTAAGTTAGATGGAGCCTTCTGTTGTGTTTCTTGTGGAAAAAGTAATGAACTGATGAAGACATGGAGAAAGCAATTATTGGTTGCCAGAGAAGCGAGAAGAATGGATATACTGTCTTTGCGAATATCCCTGGCTCACAGAATTCTTGTAGGAACAGAAATGTACAAGGAACTGCAAAAGATTGTAGAATCTGCTCTCAAATTACTGGAGAATGAAGTGGGATCACTTGATCATGTATATGCGAGGATGACACGGGGAATTGTAAGCAGGCTTTCGTGTGGTGCTGAGGTTCAGAGATTGTGCTCTACTGCAATTGAATGTTTTGATTCAAATTTTTCTGACCTTCTCTCTGTTTGTGTGGAAAAGAAAGATGCACCAACATGTTCAATTCGTTTTGAAGAGTGTCTTCCTACTTCAGTGGTTATCGTGCTCGAGTACAATGACAAACTTTTAAAGAACTTTCTAGGCTGCAGGCTTTGGCACCGAGTATCAACAACAGACTACCCTGAACAACCCACCTTCATTTTCTTGAGGCCAGAGAAAAGATTCAAGCTAGAAAACCTCCATCCTTCAACTGAGTACTTTTGCAAGGCTTCTCTGTTCAGCAGCACAGGGATTTTGGGTGCTGCAGAAGCTAAATGGGTGACCCAGTGTGAGCCCACCAATTCTGCAAAAGCTATAGCTTGTGGCGGAAATCGATTTCGATGGTCACCGCAGAGATCCTCAGGTACAGGAGTGGAAATGTGTGCACAGGACCATATAACCACAGAGTCTGCCAATTCTGACATGAAGTTATCATCTCGACAACATCCTGGGAAACCCATCATTTTGAATATCAGGGGCAGGTTTGAAGAGTTCCTCTCCAAGCCTCAGTCGCTAGAGCCTTTTTCATATAAAAATCTTGCTGCAGTTTCACCTTCCACACCTTCTAAATCTTATGAAATGAGGCAAATTCCTGGTTTGAATTCTAGAAAGCGGTCGAAGGAAAATGACTACGAGTATTCTGTGAGGGTGGTGAAATGGTTGGAGCATCTAGGCCACATAGATGAAATCTTCAGAGTAAGATTTCTGACTTGGTTCAGCCTTAAGGCTACTCAACAGGAGAGAAGGGTGGTTAGTGCTTTTGTTGATGCATTGATTGACGACCCAGCAAGCTTAGCAGACCAGCTCATACACACTTTCAGTGATGAAATATGTTGCGAGCAAAAACCCTTGTGA 1863 0.4192 MSGEESKGSAFLGTNTPYSGFLLDPAKWGVLSLPEKQRLVHEIARQSKDASNLLQTFTRRELLEIICAELGKERKYTGYTKSQMIEHLLKIISKNSNLHVIGNMPAPTRSCIGSKRKKKPASEDLQQAPLENIKEEIVKTFLCQNVACKATLNPEDSFCKRCSCCICHCYDDNKDPSLWLTCSSDLPNEESCGMSCHLQCALSNQMSGILKGSCGIKLDGAFCCVSCGKSNELMKTWRKQLLVAREARRMDILSLRISLAHRILVGTEMYKELQKIVESALKLLENEVGSLDHVYARMTRGIVSRLSCGAEVQRLCSTAIECFDSNFSDLLSVCVEKKDAPTCSIRFEECLPTSVVIVLEYNDKLLKNFLGCRLWHRVSTTDYPEQPTFIFLRPEKRFKLENLHPSTEYFCKASLFSSTGILGAAEAKWVTQCEPTNSAKAIACGGNRFRWSPQRSSGTGVEMCAQDHITTESANSDMKLSSRQHPGKPIILNIRGRFEEFLSKPQSLEPFSYKNLAAVSPSTPSKSYEMRQIPGLNSRKRSKENDYEYSVRVVKWLEHLGHIDEIFRVRFLTWFSLKATQQERRVVSAFVDALIDDPASLADQLIHTFSDEICCEQKPL* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1890 620 PANTHER VIN3-LIKE PROTEIN 2-RELATED 14 619 IPR044514 GO:0010048|GO:0040029
Pvu8g1890 620 PANTHER OS08G0220600 PROTEIN 14 619 - -
Pvu8g1890 620 Pfam PHD - plant homeodomain finger protein 143 262 IPR032881 -
Pvu8g1890 620 CDD PHD_VIN3_plant 163 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1890 Pvu-Chr8 48199762 48204262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1890 23 613 PHD Gene Family AT5G57380 34.522 1.78e-104 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1890 - - gmx:100785502 1112.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1890 8 48199762 48204262 Pvu8g1890 8 48199762 48204262 ECH