Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1882 ATGCACAACGCAACACGCACCGAAGCGGAGCGTCTCCTCGGGATCGCCGAGAAGCTTCTACAGTCCCGTGATTTGATGGGTTCGCGCGAGTTCGCGATCCTCGCTCAGGAAACTGAGCCTCTTCTTGATGGTTCCGACCAGATCCTCGCCATCGTCGACGTGCTCCTCGCCGCCGACAAACGAGTCAACAACCACCCGGACTGGTACGCCGTCCTTCAAGTCGATCGGCGCTCCGACGACCTTGACCTCATAAAGAAACAGTACCGCCGCCTTGCGCTCCTCCTTCACCCCGACAAGTCTCGCTACCCATTCGCCGACCACGCCTTCAAGCTCGTCGCCGACGCGTGGGCCTTATTCGCCGATCCCGTGAAGAAGTCGGTGTACGACAAAGAGCTCTCGTTCTTCTCGCGCGTCGATTTGTCCGTTCCCGGATGGGTCCAGCAGGAAAAGCTCTCAGTCCGCAGGTCTGGGGCTGGGCCTGAACCCGGAACAAGCACACGCAACAGTGCCTCGGCCCGCGACCAGATTCACGCTGATGAAAGTTCCCGAAGGAAAAACTCAACTTTCTGGACCGCATGTCCCTACTGTTACCGTTTGTATGAATACCCTAGGGTTTACGAGGGTAATTGTCTACGGTGCCAGAATTGCGATAGATCCTTCCACGGCGTGGCGGTTCCGTCGCTGCCGCCGCTGGTCCCCGGCCAGGATGCGTATTATTGCTGCTGGGGCTTCTTCCCCATGGGATTTGTAACGGGTAACTTCGGTTCACATGAGAAAGAGGCGGCAGCAGTGCCTGCACCGCAGCCCCCTCCTCCTCCGCCTCCTCCTCCGGCTCAACCGGCTTCTTCTCTGCCGAATTGGATGCCCGTGCCGGCGGAGAATGGTGAACAGGCGACGCCGGTGGGGGCAAGGGTGACTCGGTCGGCGGCTACGGTGGCCGCGAGAGCGACGAACGGGAGTGGGCCGAAGAAGAGGGGGAGGCCGAGGAAGTATCCGTTGCCGTCGTGA 1008 0.6042 MHNATRTEAERLLGIAEKLLQSRDLMGSREFAILAQETEPLLDGSDQILAIVDVLLAADKRVNNHPDWYAVLQVDRRSDDLDLIKKQYRRLALLLHPDKSRYPFADHAFKLVADAWALFADPVKKSVYDKELSFFSRVDLSVPGWVQQEKLSVRRSGAGPEPGTSTRNSASARDQIHADESSRRKNSTFWTACPYCYRLYEYPRVYEGNCLRCQNCDRSFHGVAVPSLPPLVPGQDAYYCCWGFFPMGFVTGNFGSHEKEAAAVPAPQPPPPPPPPPAQPASSLPNWMPVPAENGEQATPVGARVTRSAATVAARATNGSGPKKRGRPRKYPLPS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1882 335 SUPERFAMILY Chaperone J-domain 59 132 IPR036869 -
Pvu8g1882 335 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Pvu8g1882 335 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 311 - -
Pvu8g1882 335 MobiDBLite consensus disorder prediction 264 284 - -
Pvu8g1882 335 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pvu8g1882 335 PRINTS DnaJ domain signature 88 103 IPR001623 -
Pvu8g1882 335 PRINTS DnaJ domain signature 104 124 IPR001623 -
Pvu8g1882 335 Gene3D DnaJ domain 56 139 IPR036869 -
Pvu8g1882 335 Pfam DnaJ domain 67 129 IPR001623 -
Pvu8g1882 335 MobiDBLite consensus disorder prediction 153 180 - -
Pvu8g1882 335 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 311 - -
Pvu8g1882 335 SMART dnaj_3 66 124 IPR001623 -
Pvu8g1882 335 MobiDBLite consensus disorder prediction 260 335 - -
Pvu8g1882 335 CDD DnaJ 67 116 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1882 Pvu-Chr8 48017200 48018207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1882 2 333 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 49.014 7.75e-106 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1882 - - gmx:100816918 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1882 8 48017200 48018207 Pvu8g1882 8 48017200 48018207 ECH
Pvu8g1882 8 48017200 48018207 Pvu9g0386 9 7758791 7761139 PCT