Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1865 ATGGCACCCAGTTTTGATTGCTTTTCGAGTCTTCTCTGTGCGGAAGATAATATTATTTTTGACGAAAATGATCGCGGAGGTTTGGTGGAGGAGTTGGAGGACACGTGGGAGCATCCTATATATGATCGAAATCATAGTCAAATTGAGAACTTGGATGTCCAATATGTGTCGTTTCCATTGCCGAGTGACGAGTGTTTGAGACTAATGATGGAAACAGAATTGCATCACTTGCCTAATGGTGATTATGTGAGTAGGCTGAGGAGTGGGGATTTGGACATTGGGGCCAGAAAAGAGGCCATTGATTGGATTGAAAAGGTCCGTGAGCACTTTGGTTTTGGCCCTCTCTGTGCATATCTATCTATAAATTACTTGGACCGCTTCCTCTCTGTTTATGAATTACCAAAGCAACGAGCTTGGACAATGAAATTGCTGGCTGTAGGTTGCGTGTCTTTGGCAGCCAAAATGGAAGAGACTGATGTTCCTACATCTCTTGATTTGCAGGTGGGTGAATCTAAGTATATATTTGAGGCCAAAACAATACAGAGGATGGAGCTTCTGGTTCTGAACACATTGAAGTGGAGAATGCAGGCAATTACCCCATTTTCCTTCATTGACTATTTCCTTCAGAAGATCAATGATGATCAAGCACCAATTGGAGCTTCAATTTTGCAATCCTCCGAGCTTATACTGAGTACTGTAAGAGGAATTGACTTCATTGAGTTCAGACCCTCAGAGATTGCAGCAGCAGTGGCAATATCTGTGGTGGGGGAGGGCCAAACAGTTCATACAGAGAAAGCAAGTTCTGATCTGATTCAGCCTGTAGGAAAGGAGAGGGTCTTGAAGTGTGTTAAAATGATCCAAGAGCTGTCATCAGACAGTGGTTCTGCTAAGGATGCCATTCCTTCTGTTTCTGTCCCTAGCGTGCCTGAAAGCCCAATAAGGGTGTTGAACAATGCATGCTTCAGCTACAAAAGTGATGACCCAAATGCTGCTCCTTGTGCAAATTCTTCACATAATGATAGTCCAGATGCTAAAAGGAGGAAGCTAGACAAAACCTTTGGAGAATAG 1068 0.4335 MAPSFDCFSSLLCAEDNIIFDENDRGGLVEELEDTWEHPIYDRNHSQIENLDVQYVSFPLPSDECLRLMMETELHHLPNGDYVSRLRSGDLDIGARKEAIDWIEKVREHFGFGPLCAYLSINYLDRFLSVYELPKQRAWTMKLLAVGCVSLAAKMEETDVPTSLDLQVGESKYIFEAKTIQRMELLVLNTLKWRMQAITPFSFIDYFLQKINDDQAPIGASILQSSELILSTVRGIDFIEFRPSEIAAAVAISVVGEGQTVHTEKASSDLIQPVGKERVLKCVKMIQELSSDSGSAKDAIPSVSVPSVPESPIRVLNNACFSYKSDDPNAAPCANSSHNDSPDAKRRKLDKTFGE* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1865 355 SMART Cyclin_C_2 198 313 IPR004367 -
Pvu8g1865 355 CDD CYCLIN 96 188 IPR013763 -
Pvu8g1865 355 SUPERFAMILY Cyclin-like 58 195 IPR036915 -
Pvu8g1865 355 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 349 - -
Pvu8g1865 355 PANTHER CYCLINS 1 349 IPR039361 -
Pvu8g1865 355 SMART cyclin_7 101 189 IPR013763 -
Pvu8g1865 355 Pfam Cyclin, C-terminal domain 198 297 IPR004367 -
Pvu8g1865 355 MobiDBLite consensus disorder prediction 340 355 - -
Pvu8g1865 355 MobiDBLite consensus disorder prediction 330 355 - -
Pvu8g1865 355 SUPERFAMILY Cyclin-like 180 287 IPR036915 -
Pvu8g1865 355 Gene3D - 79 196 - -
Pvu8g1865 355 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
Pvu8g1865 355 Pfam Cyclin, N-terminal domain 66 195 IPR006671 -
Pvu8g1865 355 Gene3D - 67 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1865 Pvu-Chr8 47503805 47506765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1865 10 267 Core Cell Cycle Gene Families AT5G65420 51.923 3.37e-83 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1865 K18810 - gmx:100803873 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1865 8 47503805 47506765 Pvu8g1865 8 47503805 47506765 ECH