Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1863 GAGGATGAATTTACTGATAGCGATGAGGATATTCCATTGGTTAACACAGAGAATGGAAAACTTGAAAAAAAAGCAGAAGAAGTGAAAGCAGTTGGATCTAAAAAGCCAGATGCCAAAGCTACTGCTCCAGCAAAAAAAGTCAAGGTTGTTGAGCCAGAGAAAGACAATGAAGACTCTGATGATGATTCTAATGAAGATGAAGCTTTTGGAATTTCTGATGAAGAGATGGATGATGTTGACAGTGATGACAGTGACGAGGAGTCTGACAGAAATGCAGGAACTCCACACTCCGCGAAGAAAGGTGGAAAGACTCCCAACAGTGAAGGCGAGAGTCCCAAGTCCGGTGGACTCAGTTGCAAAAGTTGCAGCAAGTCTTTCAACTCCGATAGTGGTCGGCAACAATATAACAAGGCAAAACACGATGGCCAGTGA 432 0.4329 EDEFTDSDEDIPLVNTENGKLEKKAEEVKAVGSKKPDAKATAPAKKVKVVEPEKDNEDSDDDSNEDEAFGISDEEMDDVDSDDSDEESDRNAGTPHSAKKGGKTPNSEGESPKSGGLSCKSCSKSFNSDSGRQQYNKAKHDGQ* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1863 143 MobiDBLite consensus disorder prediction 55 87 - -
Pvu8g1863 143 MobiDBLite consensus disorder prediction 1 143 - -
Pvu8g1863 143 MobiDBLite consensus disorder prediction 107 133 - -
Pvu8g1863 143 MobiDBLite consensus disorder prediction 13 54 - -
Pvu8g1863 143 ProSiteProfiles Zinc finger C2H2 type domain profile. 117 143 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1863 Pvu-Chr8 47440025 47440634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1863 91 140 C2H2 Transcription Factor Family AT5G03740 40.984 3.50e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1863 - - pvu:PHAVU_008G179800g 199.904