Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1860 ATGGGAGAAGATTGTAGAACCTGGATTCCGGAGCTGTTCTTTGATTGGCAATCTCCCAATTTGAGCTCCTTCAATGCTGCACCCTTTGGCATGGGGAAGCAAAATGGTTCTTCTGCAGCTATGAATCCAGTTGCCAACTCCGTCTCAAGAGACGTGACAATGCCAGCTTATGTGTCCTCTGGGCTGCCTCATTCGCAGCTGGGACATACTGGTGAACCTCATGGTTGGTTTTATTGTTTGCCTCGCTTTCGGCAGGGATTTACTACACCTGCTCGAAACTTCACGGCAGAGGAAAAACTCCCTGCTAGCCATGGAAAAGGGTTTAGGGAGGAAATAGCCCCGGTTGGGGCGTCGGGTTTCCCTCAGAAGCAATTCCTGGTTATTGATCGAACGGCTGATCAAACAACTTTGGTTTATAGTTCAAGGTTTGGTCGGCCTGTTGAGTGCCTTACTTCCTGGGATTCAAAGCTGCATGGTTCTACCAATTTGAGCAACGGGAATGAATCTCCATCTTTGAGGAGAGATTTGAATAATGTGGTTGGACTTGGACCAACTTTGGATGATAAAGTTGATGAAAATCAGGGAACTGATGATGACATTGAAAGTGAGATGCATGAGGACACAGAGGAAATCAATGCATTGCTTTACTCTGACAGTGATGGTTATTCCACTGAGGATGATGATGATGAAGTTACTAGTACAGGACATTCACCCAGTACAATGACCACTCACGATAATCAGGAAGAACCTCGTAGGGGAACGGCCGAAGAAGTTGCTAGCTCCGTTGGAGAAACAAAGAAGCGAAAGCTGTGGGACGGGGCTTATGATGACGACACACAGTTCATTGACTCTGCTAGTTCTCTGGACGGGAAAAGACCCTTTGAAGTTGAAGATGATGCAGAATCAAGTGTTGGCAACAGTAGTAGAGGGTCAGGTGGAATGGGTTCTTGGTCGGGCAATAAAAAGATGAGAAAGGAGAAGATTCAAGATGTTCTGAGCATTCTGCAATGCATAGTTCCTGGTGGAAAGGGCAAGGACCCAGTTGTGCTTCTTGATGAAGCCATACGTTGCTTGAAATCATTGAAACTCAAGGCCATAGAGCTTGGACTTGATGCCATATAA 1122 0.4617 MGEDCRTWIPELFFDWQSPNLSSFNAAPFGMGKQNGSSAAMNPVANSVSRDVTMPAYVSSGLPHSQLGHTGEPHGWFYCLPRFRQGFTTPARNFTAEEKLPASHGKGFREEIAPVGASGFPQKQFLVIDRTADQTTLVYSSRFGRPVECLTSWDSKLHGSTNLSNGNESPSLRRDLNNVVGLGPTLDDKVDENQGTDDDIESEMHEDTEEINALLYSDSDGYSTEDDDDEVTSTGHSPSTMTTHDNQEEPRRGTAEEVASSVGETKKRKLWDGAYDDDTQFIDSASSLDGKRPFEVEDDAESSVGNSSRGSGGMGSWSGNKKMRKEKIQDVLSILQCIVPGGKGKDPVVLLDEAIRCLKSLKLKAIELGLDAI* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1860 373 MobiDBLite consensus disorder prediction 155 174 - -
Pvu8g1860 373 MobiDBLite consensus disorder prediction 155 206 - -
Pvu8g1860 373 MobiDBLite consensus disorder prediction 192 206 - -
Pvu8g1860 373 PANTHER TRANSCRIPTION FACTOR BHLH145 1 371 IPR037546 -
Pvu8g1860 373 PANTHER TRANSCRIPTION FACTOR BHLH145 1 371 - -
Pvu8g1860 373 MobiDBLite consensus disorder prediction 301 315 - -
Pvu8g1860 373 MobiDBLite consensus disorder prediction 218 265 - -
Pvu8g1860 373 MobiDBLite consensus disorder prediction 245 265 - -
Pvu8g1860 373 MobiDBLite consensus disorder prediction 284 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1860 Pvu-Chr8 47402593 47405541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1860 28 362 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 30.612 1.41e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1860 - - var:108338245 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1860 8 47402593 47405541 Pvu8g1860 8 47402593 47405541 ECH
Pvu8g1860 8 47402593 47405541 Pvu9g0399 9 7864139 7867658 PCT