Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1858 ATGCTCTACCTCACTTGCAACGCCGACACCGCAATAGCCATATGCCGCCCTCACTCCCTCAAGAAGAACAAAAAGCCCATAAGCCCAACACAGGCCCACACCCTGCCACTCTTCGCCTACTCCGACATCCTCACCGCCACCAACGCCTTCTCCGCTGACACCTTCTTAGGCAAAGGAAGCCACGGCAGCGTCTACAAAGCCGTCCTGCAAGGCGGCGCGTTCATCGCCGCCGTCAAGAAAACCAAACCCTCCAACGAGATCGAAATCCTCTCCCACGTCAAAAGCCGGCGCTTGGTCAACCTAATTGGCCTCTGCAACGACCAAACTAACTGCAACATTAACAAACTCATTGTCGTGGAGTACATGCCCAACGGTTCGCTCCACGACCTTCTCCACTCCCCCAAAACAGTTGGAACCCCCGGTTGGACCGCGCGTGTTCGGTTCGCGGTTCACGTCGCGAAAGCGGTTCGCTTGTTGCACTCGTCCGAACCGCCCGTTATTCACCGTGATATTAAATCGTCCAACGTGTTAATCGATGAGAAGTGGAAGGCGCGACTCGGTGACTTCGGACTCGCTTTTAGAGGACACGTGGCGGATTCTCGTGTGCCGCCAGCGGGGACGTTAGGGTACCTCGACCCCTGCTATCTTGCGCCGGGGGACTTGAGTCCCAAGAGTGATGTCTTCAGTTTTGGAATATTGCTGCTGGAGATAGCGAGTGGGAGGCACGCGATTGATGTGAGGCACAGTCCGCCGTCGTTGTTGGATTGGGCGATGCCGTTGGTCTGCCGTGGGGAGTTTCGGGAGATTTGCGACCCGCGAATCGGAGCGCCACCGGACATGGCAGCGTTCCGGAGGATGATGGTGCTGGCAGCGAGGTGCGTTAGGTCAACTGCGGAGAGACGGCCGACGATTGCGGAGGTGGTGGAGTGTCTGACGGCGGCGAGGAAGAATTTTGAGGCGCCGGTGATGTGGTTGAGAATGACAGGGCGTGTGGTGAAGGCGCGTGGCTATCCCTTCCCTGATTGGGACAGGAGTGAGGAATCTGTGAGAAGAGTTTTAGGTGGGAGTAGAAACAGTAAAAGGAATGGGAAGGTATCTAGTGTGTTGGGTGTAGAGTGTGGGAGTGGACCCGCAAAACATGCAGTTAGATGTAGATCCGTTGGTTCTGGTTTTTTGGGAGAAATGAAAATAAAGTCGGTTTTGGAACGGTACCCTAACCAAGAATTTGGGTCTGCGGGGCTTTTGTGA 1248 0.5553 MLYLTCNADTAIAICRPHSLKKNKKPISPTQAHTLPLFAYSDILTATNAFSADTFLGKGSHGSVYKAVLQGGAFIAAVKKTKPSNEIEILSHVKSRRLVNLIGLCNDQTNCNINKLIVVEYMPNGSLHDLLHSPKTVGTPGWTARVRFAVHVAKAVRLLHSSEPPVIHRDIKSSNVLIDEKWKARLGDFGLAFRGHVADSRVPPAGTLGYLDPCYLAPGDLSPKSDVFSFGILLLEIASGRHAIDVRHSPPSLLDWAMPLVCRGEFREICDPRIGAPPDMAAFRRMMVLAARCVRSTAERRPTIAEVVECLTAARKNFEAPVMWLRMTGRVVKARGYPFPDWDRSEESVRRVLGGSRNSKRNGKVSSVLGVECGSGPAKHAVRCRSVGSGFLGEMKIKSVLERYPNQEFGSAGLL* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1858 415 ProSiteProfiles Protein kinase domain profile. 50 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1858 415 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 339 - -
Pvu8g1858 415 SMART serkin_6 50 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1858 415 PANTHER OS01G0253100 PROTEIN 1 339 IPR045271 GO:0004714|GO:0006468
Pvu8g1858 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Pvu8g1858 415 ProSitePatterns Protein kinases ATP-binding region signature. 56 80 IPR017441 GO:0005524
Pvu8g1858 415 SUPERFAMILY Protein kinase-like (PK-like) 26 311 IPR011009 -
Pvu8g1858 415 Gene3D Transferase(Phosphotransferase) domain 1 122 323 - -
Pvu8g1858 415 Pfam Protein kinase domain 53 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1858 415 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1858 Pvu-Chr8 47351028 47352275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1858 37 314 Receptor kinase-like Gene Family AT3G59420 41.017 4.39e-61 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pvu8g1858 Pkinase 9.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1858 - - vra:106764162 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1858 8 47351028 47352275 Pvu9g0396 9 7833136 7834707 PCT