Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1851 ATGCGATCACCGAATGAGATGAAAAAGAAACGAAAAGAAAGCGAGGCCAGCGAGCGATCGAACTTGCTGGAGGTTTCGAAGTCGCATTACTCGCTAGAGCATGGTCCGAGGTTTAACAAACGGTGCAGGGAAGACTGCGTGGCCACGGTTCCCACTCGCAGCGCGTCGTCACTTTTGACCGCGTCACGGGGACTGAAGCGGAAGATAGGGTGCATTGACGAGGCCACGCGGATGGGAAGGAGCGTGAGGATCGAGAACGATTACCTGACAGGGAAGAGCACGATCGGTCAGGGGAAGTTCGGGTCGGTGACAGTTTGCCGCGCACGTGCGGGGGGCGTGGATTACGCGTGCAAGACGCTGAAGAAGGGGGAGGAGACGGTGCACCGCGAGGTGGAGATAATGCAGCACGTGTCGGGTCACCCTGGGGTTGTAACTCTGAAAGCTGTGTATGAGGATGCGGAGTGTTGGCACCTTGTGATGGAATTGTGCTCCGGGGGTAGATTGGTTGATAGGATGAGGGAGGGGCCGTGTTCGGAACACATGGCGGCTGGGATACTGAAGGAGTTAATGATGGTTGTTAAGTATTGTCATGATATGGGCGTGGTGCATAGGGATATTAAGCCCGAGAATGTTCTGATTACTGGAACTGGGATGATTAAGCTTGCTGATTTTGGTCTCGCCGTCCGAATTTGTGAGGGTCAGAATTTGACAGGTGTTGCTGGGAGCCCTGCATATGTTGCACCGGAAGTGTTGTTGGGTAGATATTCTGAGAAGGTGGATATATGGAGTTCTGGGGTGCTCCTGCATGCTTTGTTGGTTGGTTTTCTTCCATTTAAAGGCGATTCACAAGAGGCACTTTTTGAGGACATAAAAAATGTCAAACTAGATTTCCAAACGGGGGTGTGGGAATCGATATCTAAACCTGCTCGAGATCTTGTTGGGAGAATGTTGACAAGAGATGTTTCAGCAAGGATAACAGCTGATGAAGTACTGAGTCATCCATGGATATTGTTCTATACAGCGCAAACATTGAAGATGCTGCCCGTTAAATCAAAATTGAAACCCCAAAATGCAGCTATTTGCCACAAGTGTGTTACTGCACCTGAATCTGGGTTTGGAGGATACAGGATGATGGATAATTGTTCCCTAAATGGTTCGAGCACGTTTTCATCCTCAGAAAGTTGTAATTCAGAATATCATGATGACTGTGCGTGGATTGATGCACTTGCCACTGCTGTTTCACATGTGACGATATCCGAAGCTAAGAGGACCAAGTTGTGGGGTCCCACTGGTCCAATTGATCCACAAGGTTCATCTAACTTGAAGACTAACCTCTGTAAAGCATTCTGA 1350 0.4911 MRSPNEMKKKRKESEASERSNLLEVSKSHYSLEHGPRFNKRCREDCVATVPTRSASSLLTASRGLKRKIGCIDEATRMGRSVRIENDYLTGKSTIGQGKFGSVTVCRARAGGVDYACKTLKKGEETVHREVEIMQHVSGHPGVVTLKAVYEDAECWHLVMELCSGGRLVDRMREGPCSEHMAAGILKELMMVVKYCHDMGVVHRDIKPENVLITGTGMIKLADFGLAVRICEGQNLTGVAGSPAYVAPEVLLGRYSEKVDIWSSGVLLHALLVGFLPFKGDSQEALFEDIKNVKLDFQTGVWESISKPARDLVGRMLTRDVSARITADEVLSHPWILFYTAQTLKMLPVKSKLKPQNAAICHKCVTAPESGFGGYRMMDNCSLNGSSTFSSSESCNSEYHDDCAWIDALATAVSHVTISEAKRTKLWGPTGPIDPQGSSNLKTNLCKAF* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1851 449 SMART serkin_6 89 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1851 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Pvu8g1851 449 SUPERFAMILY Protein kinase-like (PK-like) 85 373 IPR011009 -
Pvu8g1851 449 PANTHER SERINE/THREONINE-PROTEIN KINASE 21 441 - -
Pvu8g1851 449 ProSitePatterns Protein kinases ATP-binding region signature. 95 118 IPR017441 GO:0005524
Pvu8g1851 449 MobiDBLite consensus disorder prediction 1 22 - -
Pvu8g1851 449 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2 21 441 - -
Pvu8g1851 449 CDD STKc_CAMK 87 335 - -
Pvu8g1851 449 Pfam Protein kinase domain 92 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1851 449 Gene3D Transferase(Phosphotransferase) domain 1 169 366 - -
Pvu8g1851 449 ProSiteProfiles Protein kinase domain profile. 89 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1851 449 Gene3D Phosphorylase Kinase; domain 1 91 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1851 Pvu-Chr8 47165379 47169129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1851 73 336 EF-hand Containing Proteins AT4G04720 45.290 2.64e-75 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pvu8g1851 Pkinase 4.9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1851 - - gmx:100809977 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1851 8 47165379 47169129 Pvu9g0359 9 7406709 7410027 PCT