Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1828 ATGGAGCGCTATGAGATTCTCAAAGATATTGGCTCTGGAAATTTTGCTGTGGCCAAACTGGTTAGGGACAACTGCACCAATGAGCTTTTTGCTGTCAAGTTTATTGAGAGAGGCCAGAAGATTGATGAGCATGTCCAGAGGGAAATCATGAACCATAGATCATTGAAGCATCCCAATATTATTAGATTCAAAGAGGTCCTGCTGACACCAACTCATCTAGCAATAGTAATGGAGTATGCTTCTGGAGGAGAACTATTTGAGAGGATATGCAATGCTGGTAGATTCAGTGAGGATGAGGGAAGATTTTTCTTTCAGCAATTGATATCTGGAGTCAGTTACTGTCATTCAATGCAAATTTGTCATAGAGATCTGAAGCTTGAAAACACTCTCTTAGATGGAAGCACTGCACCACGAGTTAAAATTTGTGACTTTTGGTTACTCAAAGGTAGTTATAATTCATCATTATTGCATTCTCAACCTAAGTCAACGGTAGGAACTCCAGCTTATATTGCACCTGAGGTTCTTACAAGGAAGGAATATGATGGAAAGATTGCAGATGTATGGTCTTGTGGAGTCACCTTATATGTGATGTTAGTTGGGGCTTATCCTTTTGAAGACCCTGCAGATCCAAGAAACTTCAAAAAAACCATTGGTAAGATACTTAGTGTCCAGTACTCAGTCCCCGATTATGTACGAGTTTCCATGGAATGTAGACATCTTCTATCACAAATATTTGTGGCAAGTCCTGAAAAGAGAATAACAATACCAGAAATTAAAAACCACCCATGGTTTTTAAGGAACTTACCCATAGAACTGATGGAAAGTGCAAGCTGGGAAATAAATGATGTAAATAATCCATCACAAAGTGTTGAGGAAGTCCTGTCTATAGTACAAGAGGCAAGAAAATCTCTTAACATTCCCATTGTTGGTGGCCTTCTAACTGGGGGCACCATGGACCTGGATGACTTGGATGCTGATGAAGAAGATCTTGAAGATGTAGAAACAAGTGGAGAATTTGTGTGCCCTCTTTAA 1032 0.3963 MERYEILKDIGSGNFAVAKLVRDNCTNELFAVKFIERGQKIDEHVQREIMNHRSLKHPNIIRFKEVLLTPTHLAIVMEYASGGELFERICNAGRFSEDEGRFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFWLLKGSYNSSLLHSQPKSTVGTPAYIAPEVLTRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPADPRNFKKTIGKILSVQYSVPDYVRVSMECRHLLSQIFVASPEKRITIPEIKNHPWFLRNLPIELMESASWEINDVNNPSQSVEEVLSIVQEARKSLNIPIVGGLLTGGTMDLDDLDADEEDLEDVETSGEFVCPL* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1828 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Pvu8g1828 343 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 2 337 - -
Pvu8g1828 343 ProSiteProfiles Protein kinase domain profile. 4 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1828 343 Pfam Protein kinase domain 4 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1828 343 Gene3D Transferase(Phosphotransferase) domain 1 80 271 - -
Pvu8g1828 343 PANTHER SERINE/THREONINE KINASE 2 337 - -
Pvu8g1828 343 CDD STKc_SnRK2 3 263 - -
Pvu8g1828 343 SMART serkin_6 4 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1828 343 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pvu8g1828 343 SUPERFAMILY Protein kinase-like (PK-like) 2 288 IPR011009 -
Pvu8g1828 343 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1828 Pvu-Chr8 46411208 46414165 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1828 3 283 CBL-interacting serine-threonine protein kinases AT4G24400 40.345 4.02e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pvu8g1828 Pkinase 3.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1828 K14498 - gmx:100798091 607.831