Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1817 TCAATTGTTTTTGGCCTGCTGGGAATTATGGCTTTTAAGATTTTCCGCTATTTTAGAGAGAAGGAAGAAGACCAAGCAAGAGTGGACAAGTTCTTAGAGGATTACAAAGCTGAAAAGCCTACGAGATTTACATACGCCGATGTCAAGAGAATCACCGATGGTTTTAAAGAAAAACTAGGGGAAGGAGCCCATGGAGCTGTTTTCAAAGGCAAACTTTCGAATGAGATTGTCGTGGCTGTGAAGATCATCAATAATACTGAAGGAGATGGGAATGAGTTCATCAACGAAGTTGGAATTATGGGAAAAATCCACCACATTCACGTGGTTCGTTTGCTAGGCTTTTGCGCCGAAGGAATCCATCGTGCTCTTGTCTACAATTTGTTTCCAAAGGGTTCACTACAAAGCTTCATATTTCCACCCGATGACAAGGAGCATTTCCTTGGGTGGGAGAAGATGCAACACATTGCTCTTGGTATAGCTAAAGGGATTGAGTATCTCCATCAAGGTTGTAATCATCCCATTATTCACTTTGACATCAATCCTCGGAATGTGTTACTTGATGACAACTTCACTCCAAAGATTTCTGATTTTGGATTAGCCAAATTGTGTTTCAAGAATCCAAGTTTGGTGTCCATGACAGCTGCTAGGGGAACCTTGGGATACATGGCACCGGAAGTTTTCTCCAGGAACTTCGGAAATGTATCCTACAAGTCTGATATTTACAGTTATGGAATGTTGTTGCTAGAAATGGTTGGAGGAAGGAAGAATGTAGACATGTCATCCTCAGAAAATATCCATGTTCTGTACCCAGATTGGATCCATAATCTTGTTGATGGAGACATACGTATCCATATTGAGTATGAAGGTGATGTTAAAATTGCGAAGAAGCTAGCCATTGTTGGACTTTGGTGCATTCAGTGGCAGCCAGTGAACCGTCCATCCATAAAATCTGTCATACAAATGCTAGAAACTAAAGAGGAACACCAGTTAACTGTGCCTCCTAATCCATTTCATTCAACGACTTCAACTCTCACTTCAGCAAGAAGACCTTTGGAGTTGGAAGCAATTCAAGAGTGA 1077 0.4123 SIVFGLLGIMAFKIFRYFREKEEDQARVDKFLEDYKAEKPTRFTYADVKRITDGFKEKLGEGAHGAVFKGKLSNEIVVAVKIINNTEGDGNEFINEVGIMGKIHHIHVVRLLGFCAEGIHRALVYNLFPKGSLQSFIFPPDDKEHFLGWEKMQHIALGIAKGIEYLHQGCNHPIIHFDINPRNVLLDDNFTPKISDFGLAKLCFKNPSLVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDMSSSENIHVLYPDWIHNLVDGDIRIHIEYEGDVKIAKKLAIVGLWCIQWQPVNRPSIKSVIQMLETKEEHQLTVPPNPFHSTTSTLTSARRPLELEAIQE* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1817 358 SUPERFAMILY Protein kinase-like (PK-like) 37 325 IPR011009 -
Pvu8g1817 358 Gene3D Phosphorylase Kinase; domain 1 26 127 - -
Pvu8g1817 358 Gene3D Transferase(Phosphotransferase) domain 1 128 335 - -
Pvu8g1817 358 ProSitePatterns Protein kinases ATP-binding region signature. 59 81 IPR017441 GO:0005524
Pvu8g1817 358 PANTHER RECEPTOR-LIKE KINASE 1 358 - -
Pvu8g1817 358 Pfam Protein tyrosine and serine/threonine kinase 55 322 IPR001245 GO:0004672|GO:0006468
Pvu8g1817 358 ProSiteProfiles Protein kinase domain profile. 53 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1817 358 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 358 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1817 Pvu-Chr8 46088849 46089927 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1817 18 336 Receptor kinase-like Gene Family AT1G66980 47.256 1.05e-93 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu8g1817 PK_Tyr_Ser-Thr 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1817 - - gmx:100813645 629.402