Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1815 ATGGTCATATGGAGAGAGATGGTGTTATTGGTGATCTTCTTGCTGTTTGTAGTCGAACAAGTATGTACTACTAATGAGCAAGAGCATGCTATGGATTGTCCCACTTCTTCCTGCGGGAAAATCACAAACATAAGTCGGCCATTCAGATTGAAACGTGATCCAGTACATTGCGGCGACAGCAGGTACGAACTGGATTGTGAAAATAATGTTGCGGTATTGAATTTGTACTCGGGAAAATATCATGTTGAGGCAATCAACTACCATAATTTCACAATCCGAGTGGTTGATCCGGGAGTTGAAGAACCAAGTTGCTCCTCCCTTCCTCGCTATTTCTTGTCTGAATCCAATTTCACTGATGCTTATCATGGTGCCGCCATGGCTCCATACCGAAGCACCCAAAACCAATTCTCTGATGAATTGGGTAATTACGAGAAGAGTCTTTGGAAGCACATAATTTACTTGAATTGTAGCCATCCAGTGAGTGAGAAGAATAAGTACGTGAATACTGCTCCGTGTGTGAAGTGGCAGTCGAAAGGCTACATGTATGCCATCGGTGGTGACATAACAGCAGCGGAACTTGAAGTTGGTTGTGGTGTAAAGCTGGTATCTCCGACGTCTTGGGGGGGTTTGGACGCAAATGAATCTTCCTACACTGATATGAACACAGCGTTACTTTATGGATTTGAGATGTCGTGGTTGCATTTCGCCTGTGATTATCTATGTCCAAACTCAACTCATGGCGACTGCTATTTCAACTCTTCCATCCCTAAGCTTAAATGCTCGCTCTGCGACGATATGTTATTCGGACGACTGCTAGTTCCCTGTGTACTGTTGGACACAATACAAGGAAACCTAGGATTTGGTGCAAATTACTACTTTGATCCGGTATCGTTTATCATAGGACGCTATATTTTACCATTTTTCTTGGCAGTTAGATTTCTGTTTGGGGTGACATTACTTATTGTGCTTATGGTATACAAATGGAGGAAAAGGCATTTGTCAATATATGAAAATATTGAAAATTATTTAGAACATAATAATTTGATGCCTATTAGATACTCATACAAGGAAATCAAGAAGATGATGAAAGGTTTCAAGGAAAAATTGGGTGAAGGAGGCTATGGCTCTGTGTTTAAGGGAAAGTTGTCTAGTGGATCTTGTGTGGCAATAAAAATGTTAAGTAAAACAAAAGGAAGAGGACATGACTTTATTAGTGAAGTTGCTACCATTGGAAGAATACATCATCAAAATGTAGTACAATTAATTGGATTTTGTGTTGAAGGTTCGAGACATGCTCTTGTTTATGAATTCATGTCTAATGGATCTCTTGATAAAATTATCTTTTCTAAAGATAAAAGTATAGAGTTTGGCTATGACAAAATATACAATATAGCAATTGGGGTAGCTCGAGGGATTGCTTATCTCCACCATGGATGTGAGATGCAAATTTTGCATTTTGATATAAAACCCCATAATATTCTACTTGATGATAAATTCATTCCAAAGGTCTCTGATTTTGGATTGGCAAAGTTATATCCGATAGATAATAGCATTGTCACCATGACAACAGTAGGAGGAACAATTGGATACATGGCTCCAGAATTGTTTTATAAAAATATTGGAAGAATATCCTATAAGTCTGATGTTTATAGTTTTGGAATGCTTTTAATGGAGATGGCAAGTAGGAGGAAAAACTTAAATTCCCATGTAGAGCATTCAAGCCAAATTTATTTTCCCTCTTGGATTTATGATTACATTAGAGAAGAGAAAGATATAGAAATGGAAGAAATGGGAAATTTCACAGAGGAGGAAAAGAAAATAGTAAAGAAGATGATCATAGTTGCATTTTGGTGTATACAAATGAATCCAGATGATCGTCCCTCCATGAACAAAGTAGTGGAAATGCTTGAAGGAGACATTGAAAAATTGAAAATCCCTCCCAATTTTTCTTTATATCCATATGAAGCGACAGAATACTCTAAACAAACAATAGCAACTGAATTTACTTGTTCTTCTAGTTATTCTTTGGATATTGATTAA 2040 0.374 MVIWREMVLLVIFLLFVVEQVCTTNEQEHAMDCPTSSCGKITNISRPFRLKRDPVHCGDSRYELDCENNVAVLNLYSGKYHVEAINYHNFTIRVVDPGVEEPSCSSLPRYFLSESNFTDAYHGAAMAPYRSTQNQFSDELGNYEKSLWKHIIYLNCSHPVSEKNKYVNTAPCVKWQSKGYMYAIGGDITAAELEVGCGVKLVSPTSWGGLDANESSYTDMNTALLYGFEMSWLHFACDYLCPNSTHGDCYFNSSIPKLKCSLCDDMLFGRLLVPCVLLDTIQGNLGFGANYYFDPVSFIIGRYILPFFLAVRFLFGVTLLIVLMVYKWRKRHLSIYENIENYLEHNNLMPIRYSYKEIKKMMKGFKEKLGEGGYGSVFKGKLSSGSCVAIKMLSKTKGRGHDFISEVATIGRIHHQNVVQLIGFCVEGSRHALVYEFMSNGSLDKIIFSKDKSIEFGYDKIYNIAIGVARGIAYLHHGCEMQILHFDIKPHNILLDDKFIPKVSDFGLAKLYPIDNSIVTMTTVGGTIGYMAPELFYKNIGRISYKSDVYSFGMLLMEMASRRKNLNSHVEHSSQIYFPSWIYDYIREEKDIEMEEMGNFTEEEKKIVKKMIIVAFWCIQMNPDDRPSMNKVVEMLEGDIEKLKIPPNFSLYPYEATEYSKQTIATEFTCSSSYSLDID* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1815 679 Pfam Protein kinase domain 366 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1815 679 Pfam Wall-associated receptor kinase galacturonan-binding 33 96 IPR025287 GO:0030247
Pvu8g1815 679 SUPERFAMILY Protein kinase-like (PK-like) 348 637 IPR011009 -
Pvu8g1815 679 SMART serkin_6 363 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1815 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Pvu8g1815 679 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 8 664 - -
Pvu8g1815 679 Gene3D Phosphorylase Kinase; domain 1 337 437 - -
Pvu8g1815 679 PANTHER RUST RESISTANCE KINASE LR10-RELATED 8 664 IPR045874 GO:0004672
Pvu8g1815 679 Gene3D Transferase(Phosphotransferase) domain 1 438 645 - -
Pvu8g1815 679 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Pvu8g1815 679 ProSiteProfiles Protein kinase domain profile. 363 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1815 Pvu-Chr8 46083029 46087295 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1815 11 652 Receptor kinase-like Gene Family AT5G38260 33.536 9.47e-112 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu8g1815 Pkinase 3.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1815 - - vun:114195039 1017.68