Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1807 ATGGCAAAGCCTAGTCTACTGTCTCTCCATGGTTATGGCATATTGATCACAATAATGCTATTCCTAAAGCTCATTCTTATCAAAGGTAGCAGCGATCATAACGAGTGCAGGGAGTTGTCTTGTGGGCTAAACCAAACACCTATTAGATTTCCCTTCCAACTCGCCAAGGGGACGCATGAATGTGCTCATCCTGGGTATTGTCTGTATTGCACTCAAGAAAACAACACCATGCTTCTCCTCCCTACCATTAAATTCCACGTCATAAACATAGACTACGAAAATCGGCAAATTTCCTTGAAAGACCCGAAGAATTGCCTTCCAAAATATTTTCTAAACCACAACAATTCTTTTAATCATTATTACTTTACCGGAAGCGGCGTAAGCTTCTTTGACTGTTCTTCACTTGGGTATAGACATCTCAGAAATCAATATGGAAACTACCAAGATATGATCTCCTGTCCGATATACGCTACTGATTCTCAAGCAAGTATCTTGGAATGGGACCTGACATTCTGTTCTAAGATATCCGATGTCACTGCACCAGTCTCGGCAATCGAGATGCAGCAGAATGAGTTCATGTTGACATGGTCCAAACCAGTTTGTTCTGCGTGCGAAGCTGAAGGCAAAAGATGTAAATGGAAGAACAACAGCACCGAACTTATCGAATGTTTGGATTGCTCTGACCACAAGGGCCTCCATAAAAGAATCACAAATTTCAGATCTTTTATTTTTTCCAGTACAGTTATCGTAGGTTCAATTGTTTTTGGCCTGCTGGGAATTATGGCTTTTAAGATTTTCCGCTATTTTAGAGAGAAGGAAGAAGACCAAGCAAGAGTGGACAAGTTCTTAGAGGATTACAAAGCTGAAAAGCCTACGAGATTTACATACGCCGATGTCAAGAGAATCACCGATGGTTTTAAAGAAAAACTAGGGGAAGGAGCCCATGGAGCTGTTTTCAAAGGCAAACTTTCGAATGAGATTCTCGTGGCTGTGAAGATCATCAATAATACTGAAGGAGATGGGAATGAGTTCATCAACGAAGTTGGAATTATGGGAAAAATCCACCACATTCACGTGGTTCGTTTGCTAGGCTTTTGCGCCGAAGGAATCCATCGTGCTCTTGTCTACAATTTGTTTCCAAAGGGTTCACTACAAAGCTTCATATTTCCACCCGATGACAAGGAGCATTTCCTTGGGTGGGAGAAGATGCAACACATTGCTCTTGGTATAGCTAAAGGGATTGAGTATCTCCATCAAGGTTGTAATCATCCCATTATTCACTTTGACATCAATCCTCGGAATGTGTTACTTGATGACAACTTCACTCCAAAGATTTCTGATTTTGGATTAGCCAAATTGTGTTTCAAGAATCCAAGTTTGGTGTCCATGACAGCTGCTAGGGGAACCTTGGGATACATGGCACCGGAAGTTTTCTCCAGGAACTTCGGAAATGTATCCTACAAGTCTGATATTTACAGTTATGGAATGTTGTTGCTAGAAATGGTTGGAGGAAGGAAGAATGTAGACATGTCATCCTCAGAAAATATCCATGTTCTGTACCCAGATTGGATCCATAATCTTGTTGATGGAGACATACGTATCCATATTGAGTATGAAGGTGATGTTAAAATTGCGAAGAAGCTAGCCATTGTTGGACTTTGGTGCATTCAGTGGCATTCAGTGAACCGTCCATCCATAAAATCTGTCATACAAATGCTAGAAACTAAAGAGGAACACCAGTTAACTGTGCCTCCTAATCCATTTCATTCAACGACTTCAACTCTCACTTCAGCAAGAAGACCTTTGGAGTTGGAAGCAATTCAAGAGTGA 1830 0.4109 MAKPSLLSLHGYGILITIMLFLKLILIKGSSDHNECRELSCGLNQTPIRFPFQLAKGTHECAHPGYCLYCTQENNTMLLLPTIKFHVINIDYENRQISLKDPKNCLPKYFLNHNNSFNHYYFTGSGVSFFDCSSLGYRHLRNQYGNYQDMISCPIYATDSQASILEWDLTFCSKISDVTAPVSAIEMQQNEFMLTWSKPVCSACEAEGKRCKWKNNSTELIECLDCSDHKGLHKRITNFRSFIFSSTVIVGSIVFGLLGIMAFKIFRYFREKEEDQARVDKFLEDYKAEKPTRFTYADVKRITDGFKEKLGEGAHGAVFKGKLSNEILVAVKIINNTEGDGNEFINEVGIMGKIHHIHVVRLLGFCAEGIHRALVYNLFPKGSLQSFIFPPDDKEHFLGWEKMQHIALGIAKGIEYLHQGCNHPIIHFDINPRNVLLDDNFTPKISDFGLAKLCFKNPSLVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDMSSSENIHVLYPDWIHNLVDGDIRIHIEYEGDVKIAKKLAIVGLWCIQWHSVNRPSIKSVIQMLETKEEHQLTVPPNPFHSTTSTLTSARRPLELEAIQE* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1807 609 Pfam Protein tyrosine and serine/threonine kinase 306 571 IPR001245 GO:0004672|GO:0006468
Pvu8g1807 609 Gene3D Phosphorylase Kinase; domain 1 277 378 - -
Pvu8g1807 609 Pfam Wall-associated receptor kinase galacturonan-binding 36 101 IPR025287 GO:0030247
Pvu8g1807 609 PANTHER RECEPTOR-LIKE KINASE 23 609 - -
Pvu8g1807 609 Gene3D Transferase(Phosphotransferase) domain 1 379 586 - -
Pvu8g1807 609 PANTHER RUST RESISTANCE KINASE LR10-RELATED 23 609 IPR045874 GO:0004672
Pvu8g1807 609 SUPERFAMILY Protein kinase-like (PK-like) 288 576 IPR011009 -
Pvu8g1807 609 ProSiteProfiles Protein kinase domain profile. 304 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1807 609 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1807 Pvu-Chr8 45943008 45945028 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1807 19 596 Receptor kinase-like Gene Family AT1G66910 32.868 8.46e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu8g1807 PK_Tyr_Ser-Thr 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1807 - - gmx:100811907 848.195