Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1766 ATGAAGAAGGTCACAACAATTGCTTCAATCTTTTTGATCGCGCTACTTTGTTTGCACGAACTCGTCCACGTATCTTCGTCACCTTTCTTATACGCAAGCCAGGTCTATGAGGAATCTTCTGGTGAAAGAAAACTTAAACAGGACCGGGAACAGGGACAGGAACATGCTCAAGAATTGCATTGCTCCAGGGAGAGAAGTAGGGCAGCTCGGAAAGTGATAGAGGAGTATTTGATACCATTTGTGGAACGAGAAAACTACCAGCTTTCAACTAAATGCAGACTTCACCCTGAAAATGATATATTTAGCGATCAGGAAGAGCATAAAATTTTCATAGATAGACATGAATGGCGGTGTGGATATTGCAAGAAAAGCTTTCGGGAAGAGAAATTTCTCGATCACCATTTTGATAATAGACACTACAATCTTCTGAATCTGACTCATGGTAAATGCTTGGCTGATTTATGTGGGGCGATGCATTGTGATGCTGTGATGAATTTCAGATCCTCCAGAAGCAAGTGCAATCTGGCAGCTGCTTCTAAAAATCGTCATCTATGTGAGAGTCTTGCTGACAATTGTTTTCCTATAAGTGAGGGTCCATCAGCAGCTCGCCTTCATGAATTGTTTCTGCACCAATTTTGTGATGCTCACACTTGCTCGGGGAAACTTAAACCCTTCTCTCGAGGAGGCAAGGATCAAAGTAGTTTCTTCCGCCTGGCTGCTGGAGCACTGATCTTGGTGCTACTTCCTGTGTTCTATCTTTTTCTTTATTTGATACAAAGTGATGTGAAGAGTCGAACCCAAGAGCTTCGTCGCATTTCGAAAGCTGGATGGAAAACAAAACCATCATGA 849 0.4252 MKKVTTIASIFLIALLCLHELVHVSSSPFLYASQVYEESSGERKLKQDREQGQEHAQELHCSRERSRAARKVIEEYLIPFVERENYQLSTKCRLHPENDIFSDQEEHKIFIDRHEWRCGYCKKSFREEKFLDHHFDNRHYNLLNLTHGKCLADLCGAMHCDAVMNFRSSRSKCNLAAASKNRHLCESLADNCFPISEGPSAARLHELFLHQFCDAHTCSGKLKPFSRGGKDQSSFFRLAAGALILVLLPVFYLFLYLIQSDVKSRTQELRRISKAGWKTKPS* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1766 282 ProSitePatterns Zinc finger C2H2 type domain signature. 118 139 IPR013087 -
Pvu8g1766 282 PANTHER ZINC FINGER PROTEIN-RELATED 12 282 - -
Pvu8g1766 282 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 12 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1766 Pvu-Chr8 44439237 44443537 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1766 32 282 C2H2 Transcription Factor Family AT5G63280 60.558 3.19e-105 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu8g1766 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1766 - - gmx:100780668 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1766 8 44439237 44443537 Pvu8g1766 8 44439237 44443537 ECH