Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1754 ATGGCTAGAAGGATTATGGGTTTCTCTCCTAATAGAGCCCAGGATCCACAGTACCCACCTATGGTTAGACAAAGCTCTTTATACAACCTCACCTTTGATGAGGTTGAGAGCCAGTTGGGAAACACAGAGAAGCCTATCCATGATATGTCCTTGGATGACTTTCACAAAAGTGTTATCTCAGCTGAAAGTGGACAACTTGTGCAAACTTCATCAAATCATCATTCATTTACTCTTGGGAACATGAGCAATGGTATGCATGACACCAAAAATGGCATCAGTGAGGGTTGGAGGGGAATTGTTGACCAAGAACATATGAACAGGTGTGTAGACACCCTCTTGAAACAACCTACTTTAGGGGAATCATCATCTTTAGAACATTTACTAGCTAATAATGTAGCTGATCAGAATGCTAACGTTCACACTACAACCCCGATGGTAATTGATCCGATACATCAACAGCATTGGTTGCAAATTCCTTCCATTAACACCCACCAATCTCCGCATGAGCCACAGATGATTGGAAATTCTCAAGATTTCAATGTTTCAAAGTCATTCTACGATAGCCAACTTAGTTATTCAGAAAATTCAGTGGGGGTTTCATTGTCTCCTTCCTATTCAGATTCTAAGAGTCCTCTTTTTGGGAAGAGAAAGCAGTCAAACGAGACGCTGGAAAAGGCTGTGGAAAGAAGACAGAAGAGGATGGCTAAGAACAGGGAATCTGCAGCAAGATCAAGGGCAAAGAAGCAGGAACACATACATAGATTAGAGAACGAGAAGTGTCGCCTTCAGAAAGTGAATAGCTGGCTCAAACAGCTGAAGGAATTGGATGCAAAGTTATTTTCATCTACTACTCCAACTCCAAGATACCAACTACGTCGTAGCAGCTCAACCAATTTTTAG 900 0.4167 MARRIMGFSPNRAQDPQYPPMVRQSSLYNLTFDEVESQLGNTEKPIHDMSLDDFHKSVISAESGQLVQTSSNHHSFTLGNMSNGMHDTKNGISEGWRGIVDQEHMNRCVDTLLKQPTLGESSSLEHLLANNVADQNANVHTTTPMVIDPIHQQHWLQIPSINTHQSPHEPQMIGNSQDFNVSKSFYDSQLSYSENSVGVSLSPSYSDSKSPLFGKRKQSNETLEKAVERRQKRMAKNRESAARSRAKKQEHIHRLENEKCRLQKVNSWLKQLKELDAKLFSSTTPTPRYQLRRSSSTNF* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1754 299 Coils Coil 238 258 - -
Pvu8g1754 299 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 227 271 IPR004827 GO:0003700|GO:0006355
Pvu8g1754 299 MobiDBLite consensus disorder prediction 1 20 - -
Pvu8g1754 299 Gene3D - 227 279 - -
Pvu8g1754 299 SUPERFAMILY Leucine zipper domain 229 271 IPR046347 GO:0003700|GO:0006355
Pvu8g1754 299 MobiDBLite consensus disorder prediction 234 253 - -
Pvu8g1754 299 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 14 297 IPR043452 GO:0003700|GO:0045893
Pvu8g1754 299 CDD bZIP_plant_BZIP46 229 283 - -
Pvu8g1754 299 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 2-RELATED 14 297 - -
Pvu8g1754 299 MobiDBLite consensus disorder prediction 197 217 - -
Pvu8g1754 299 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 232 247 IPR004827 GO:0003700|GO:0006355
Pvu8g1754 299 MobiDBLite consensus disorder prediction 197 224 - -
Pvu8g1754 299 Pfam bZIP transcription factor 229 275 IPR004827 GO:0003700|GO:0006355
Pvu8g1754 299 SMART brlzneu 225 288 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1754 Pvu-Chr8 44070677 44077329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1754 23 299 bZIP Transcription Factor Family AT3G56850 37.457 1.69e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu8g1754 bZIP_1 7.8e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1754 K14432 - gmx:100808654 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1754 8 44070677 44077329 Pvu8g1754 8 44070677 44077329 ECH