Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1753 ATGAACTCTTCATCGACTCAACTAGTCCTCGCGAAAAGGATGGGTATATATGATCCATTCCATCAAGTGAACATGTGGGGGGACACCTTTAAAATTGATGGAAGCTTGAATTCAATTGCTACGCCAATGTTCATGACGAAGTCTAGCATGCAGAACAAGTCTGAATGTACTCCTCATGAATCAAGGGAACCTTCTGGAGATGATCAAGAGACTAATGAGAAAGCTGATAGTAAGGTGCTAAGACGTCAAGCTCAAAATCGTGAGGCTGCACGAAAATGTCGGCTGCGGAAGAAGGCTTATGTTCAGCAATTAGAAACAAGCCGTGTGAAGCTTATGCAATTGGAATTGGAGATTGAGAAAGCAAAAAAGCAGAGTATGTACATACGCAGTGCACCAGATCTTAGTTATATGGGATCATCTGGAACAATTAACCCAGGGATAGCCTTGTTTGAACTCGAATATGGACAATGGATTGAAGAGCTCTGTAGACAAAATGAAGAACTGAGAAATGCATTACAAACTCGTGAATCTGATATGCAGCTTCATCTACTTGTTGAGAGTTGCCTGAGCCACTACTCAAATCTTTTCAGGATGAAAGCAGAGGCAGCAAAAGCCGATGTCTTTTATTTGATCTCTGGTGCATGGAAAGCATCAGTGGAACGCCTTTTTCTTTGGATTGGAGGATCTCGTCCATCGCAGCTTCTAAATATTATTGTTCCACAGCTTGAGCCTTTGACTGATCAACAAATTGTGAGTATTAACAACCTCCGGCTTTCGTCTCAGCAAGCTGAAGATGCCCTTTCACTTGGATTGGACAAACTCCAGCAGAGTCTAGTCCACAACATTCCATCAGATCCCTTAGTTATAGGACACTACGGGTTTGAGATGGCTGCTGCCATGGACAAAGGTGAAGCACTAGAAGGTTTTGTAAACCAGGCAGATCACCTTAGGCAGCAAACTCTGCTTTACATGTCAAGGATTCTAACAACTGGGCAAGCAGCTCAAGGCTTGCTGGCTATGGGGGAGTACTTCCATCGTCTTCGCACTCTTAGTTCTTTATGGACTGCTCATTCATGTGATCCTTCCTTTCCCACTCATTTCTCAAACTGA 1110 0.4333 MNSSSTQLVLAKRMGIYDPFHQVNMWGDTFKIDGSLNSIATPMFMTKSSMQNKSECTPHESREPSGDDQETNEKADSKVLRRQAQNREAARKCRLRKKAYVQQLETSRVKLMQLELEIEKAKKQSMYIRSAPDLSYMGSSGTINPGIALFELEYGQWIEELCRQNEELRNALQTRESDMQLHLLVESCLSHYSNLFRMKAEAAKADVFYLISGAWKASVERLFLWIGGSRPSQLLNIIVPQLEPLTDQQIVSINNLRLSSQQAEDALSLGLDKLQQSLVHNIPSDPLVIGHYGFEMAAAMDKGEALEGFVNQADHLRQQTLLYMSRILTTGQAAQGLLAMGEYFHRLRTLSSLWTAHSCDPSFPTHFSN* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1753 369 Coils Coil 97 124 - -
Pvu8g1753 369 MobiDBLite consensus disorder prediction 49 83 - -
Pvu8g1753 369 Coils Coil 158 178 - -
Pvu8g1753 369 ProSiteProfiles DOG1 domain profile. 147 357 IPR025422 GO:0006351|GO:0043565
Pvu8g1753 369 Pfam bZIP transcription factor 77 126 IPR004827 GO:0003700|GO:0006355
Pvu8g1753 369 Pfam Seed dormancy control 166 239 IPR025422 GO:0006351|GO:0043565
Pvu8g1753 369 PANTHER FACTOR TGA7, PUTATIVE-RELATED 14 360 - -
Pvu8g1753 369 SUPERFAMILY Leucine zipper domain 79 120 IPR046347 GO:0003700|GO:0006355
Pvu8g1753 369 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Pvu8g1753 369 MobiDBLite consensus disorder prediction 56 83 - -
Pvu8g1753 369 SMART brlzneu 73 134 IPR004827 GO:0003700|GO:0006355
Pvu8g1753 369 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 111 IPR004827 GO:0003700|GO:0006355
Pvu8g1753 369 Gene3D - 77 130 - -
Pvu8g1753 369 PANTHER TRANSCRIPTION FACTOR TGA9 14 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1753 Pvu-Chr8 44024319 44028933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1753 2 362 Calmodulin-binding Proteins AT1G77920 54.762 6.40e-136 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu8g1753 DOG1 1.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1753 K14431 - gmx:100775882 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1753 8 44024319 44028933 Pvu9g0277 9 6052599 6055796 PCT