Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1744 ATGAATCACCTACCTCGACTATTCGGCAATAGAAAGAAGCCCCCGACCATGGACCCCAAGAAGAGCAAGACGCGAGGCAAGAAGCAGCAGCCCAAGCTCGAGCGCCGCAACGCCGCCAAGCACTTCGAATACGACGCCGGATCCTCCTCCTCGTTGCGGGGTGACTCCGCCTCCGTCTCGACGTCGTCTTCCTCGTCGTCTTCGCTCTACATGCGCTCCATGGACTTCTACGACCGCAGGAGCTTCCGAATCGAGGGCGTGGAGGGCGAGTTCGACCGGATTTGTCGCAGCCTCGGCCTCTCCGGTCCGGAGGACTTCTCCATTCCGGCCGCCACCTGGGAGGCTATGAAGCTCCGCTCCTCCTCCGACATCCCGTCGCTCCGGAACCACGACGGGAAGGCGTTAGACGAGGAGGCGAAGGAGAAGGAGAAGGAGGAAATTGAAGTGGTTGAGAACGAGGGTGGGGTTAGGGTTTTGGATGAGTGTGTTGTCCCTGCTGAGAGTAGTAATTGCTGCTCCGCTGGCGGCGGCGGAATTAAGGGTTTTCGGCCTCCGATGCTGAAGCCGCCGCCGGGTGTTAGGGTTTCGGTGGTGGACGAAACGTGTTCCACGTGGGATTTGTTGCGGGATTTTGCGCCGATAGGGGAGGGAGGGAAGGAGAGTTACGTGGAGTTGAGTGGTTCTGATGAAGATGAAGACGAGGACCGAGAAGAAAAGGAGGATGAGGATGAGAATGAGGAAGAAGGGGAAGTTGGTGGAGTGAGGGTGGAGAGAGAAGAGGAGGAAAACGCGGCGAGGATTGCGGATATTGTGGACGAGTTTTCAGGGTTTTCTACTTCGAATGAAGATGATTCTTCTAGCACTACCACGGGTCCTAATTCTAATAATATATCTCCTAATGGGAGAATCAAGCGTGTGATTTCCGCGGGTAACTGGCAGAAGGGTGATCTTTTGGGGCGTGGCTCGTTTGGCTATGTCTATGAAGGGATTTCTGAAGATGGGTTCTTTTTTGCTGTAAAACAAGTTTCACTACTTGATCAAGGGAATCAGGCAAGGCAAAGTGTATATCAACTGGAACAGGAAATTGCACTTTTGAGTCAATTTGAACACGAGAATATAGTTCAATACTTTGGCACTGAAATGGATGCGTCAAATCTGTATATCTTTATTGAGCTTGTAACTAAAGGTTCTCTTAGAGACCTCTACCAGAGATATACTCTTCGAGATTCTCAAGTATCTGCATATACAAGGCAGATTTTGCATGGTTTAAAGTATCTCCATGATCGAAACATCGTTCACAGGGACATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTTAAGCTTTCAGATTTTGGATTGGCAAAGGCAATCAAATTAAATGATGTTAAATCATGCAAGGGAACAGCATTCTGGATGGCCCCAGAGGTTGTAAGAGGTAAACAGAAAGGTTATGGGCTTCCAGCCGATATATGGAGTTTGGGATGTACTGTGTTAGAGATGTTAACTGGCCAATTTCCATACTCTCACTTAGAATGTATGCAGGCATTGTTTAGAATTGGAAGAGGCGAGCTCCCCATTGTGCCAGAATCCCTTTCAAGGGATGCACAGGATTTTATCCTGCAGTGTCTCAAAGTTAATCCAGATGAACGTTCCTCTGCTGCTAAACTCTTAAATCATACCTTTGTCCAAAGGCCGCTACTTTCCCAGTCCTCTGGTTCTGCATCTCCTTATATTCGAAGGGGATAA 1755 0.49 MNHLPRLFGNRKKPPTMDPKKSKTRGKKQQPKLERRNAAKHFEYDAGSSSSLRGDSASVSTSSSSSSSLYMRSMDFYDRRSFRIEGVEGEFDRICRSLGLSGPEDFSIPAATWEAMKLRSSSDIPSLRNHDGKALDEEAKEKEKEEIEVVENEGGVRVLDECVVPAESSNCCSAGGGGIKGFRPPMLKPPPGVRVSVVDETCSTWDLLRDFAPIGEGGKESYVELSGSDEDEDEDREEKEDEDENEEEGEVGGVRVEREEEENAARIADIVDEFSGFSTSNEDDSSSTTTGPNSNNISPNGRIKRVISAGNWQKGDLLGRGSFGYVYEGISEDGFFFAVKQVSLLDQGNQARQSVYQLEQEIALLSQFEHENIVQYFGTEMDASNLYIFIELVTKGSLRDLYQRYTLRDSQVSAYTRQILHGLKYLHDRNIVHRDIKCANILVDANGSVKLSDFGLAKAIKLNDVKSCKGTAFWMAPEVVRGKQKGYGLPADIWSLGCTVLEMLTGQFPYSHLECMQALFRIGRGELPIVPESLSRDAQDFILQCLKVNPDERSSAAKLLNHTFVQRPLLSQSSGSASPYIRRG* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1744 584 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
Pvu8g1744 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Pvu8g1744 584 MobiDBLite consensus disorder prediction 49 70 - -
Pvu8g1744 584 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 77 578 - -
Pvu8g1744 584 MobiDBLite consensus disorder prediction 1 70 - -
Pvu8g1744 584 Gene3D Transferase(Phosphotransferase) domain 1 309 579 - -
Pvu8g1744 584 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 77 578 - -
Pvu8g1744 584 MobiDBLite consensus disorder prediction 226 250 - -
Pvu8g1744 584 MobiDBLite consensus disorder prediction 251 268 - -
Pvu8g1744 584 ProSiteProfiles Protein kinase domain profile. 312 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1744 584 SUPERFAMILY Protein kinase-like (PK-like) 300 571 IPR011009 -
Pvu8g1744 584 SMART serkin_6 312 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1744 584 MobiDBLite consensus disorder prediction 274 301 - -
Pvu8g1744 584 MobiDBLite consensus disorder prediction 216 301 - -
Pvu8g1744 584 Coils Coil 133 153 - -
Pvu8g1744 584 Pfam Protein kinase domain 313 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1744 Pvu-Chr8 43656143 43675288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1744 32 569 MAP Kinase Kinase Kinase AT4G08500 51.933 4.18e-171 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pvu8g1744 Pkinase 2.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1744 K13414 - gmx:100819177 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1744 8 43656143 43675288 Pvu8g1744 8 43656143 43675288 ECH
Pvu8g1744 8 43656143 43675288 Pvu9g0264 9 5927025 5934925 PCT