Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1739 ATGGAAACTCAGGGTGAAGAGCATGCTTCAAAGTTGTTTCGAGCTCAAACCCATATTTGGAATCATATGTTCAAATTCATAAACTCTTTGTCTCTTAGATGTGCTATTGACTTGAGCATACCAAATATCATACACAACTATGGCCAACCTATGCCACTCTCAAAACTCATTTCTTCATTACCACTCCACCCTTCCAAAACCTGCTTTATCAGCCGCTTGATGAGAATTTTGACTCATTCTGGTTTCTTCTCTGAACACCATGCCACCCAAAATGAGCCTGAAGTGATGTATGTGCTAACTGATGCATCTAAATTACTCCTAAAGGACCAGCCCTCCAGCATGGCATCTTTGTTACAGCTCATAGTTGATCCAGTTTATATTAATACATGGTATCAACTCTCTACTTGGTTCACAAATGAAGACCCTACACCATTTCACGCTGAAAATGGGATGACATTTTGGGATTTTGCTAGGTGTAAGCGTGAATTCAATAACCTTTTCAACGATGCCATGGCTAGTGACTCTCATTGGGTTTCTAGTGTAGTGATTGAGAAATGTGAGGGGGTGTTTAATGGATCAAAGTCATTCGTTGATGTTGGAGGGGGAACAGGGACTATGGCTAAGGCCATTGCTAAGTCATTCCCACAACTAAACTGCATTGTATTGGATCTGCCACATGTTGTTGCTGACTTGCAAGAAACTGAGAACATAAAAATATGTTGGAGGGGATATGTTTGA 738 0.4065 METQGEEHASKLFRAQTHIWNHMFKFINSLSLRCAIDLSIPNIIHNYGQPMPLSKLISSLPLHPSKTCFISRLMRILTHSGFFSEHHATQNEPEVMYVLTDASKLLLKDQPSSMASLLQLIVDPVYINTWYQLSTWFTNEDPTPFHAENGMTFWDFARCKREFNNLFNDAMASDSHWVSSVVIEKCEGVFNGSKSFVDVGGGTGTMAKAIAKSFPQLNCIVLDLPHVVADLQETENIKICWRGYV* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1739 245 Pfam O-methyltransferase domain 130 232 IPR001077 GO:0008171
Pvu8g1739 245 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Pvu8g1739 245 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 245 IPR016461 GO:0008168
Pvu8g1739 245 SUPERFAMILY "Winged helix" DNA-binding domain 9 111 IPR036390 -
Pvu8g1739 245 Gene3D - 2 106 IPR036388 -
Pvu8g1739 245 PANTHER O-METHYLTRANSFERASE 5 238 IPR016461 GO:0008168
Pvu8g1739 245 Gene3D Vaccinia Virus protein VP39 107 240 IPR029063 -
Pvu8g1739 245 PANTHER ORCINOL O-METHYLTRANSFERASE 5 238 - -
Pvu8g1739 245 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 239 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1739 Pvu-Chr8 43437741 43438523 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1739 30 230 Monolignol Biosynthesis Gene Families AT5G54160 30.732 4.35e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1739 - K16040 pvu:PHAVU_008G1678001 510.375