Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1735 ATGTTGTCCTACATACACCTTTCCAACGATGTTCTCCTCCAACCCGTTTTCCTTCATTGCTTATCAGGCTTCCTCCACCTTCTGTTGCTCGTCGCGGTTCCACTGTCACTGGTTTGGAAGAATTTCACTACACGTGTCAGGGATGAGTCTAAGGAGAAGCACGACGACACCCTCTTCAAAACAACCGTGTTTTGTTCTCTGGGTGTTTCTGCTTTCAGTTTTCTCCTCTGTTTGTTTAGTTACTTCTACTGGTACTCTAGTGGTTGGTCAGAAGAAGAGCTCGTGACCCTTTTGGATTTGGTGCTCAAAACAGTTGCGTGGGGCGTTGTTTGTGTTTGCTTGAACAAGGGGTTCTTCAGTTCAGGCGAAAGAAGGTTCTCATTCCTTTTCAGAGCTTGGTGCGTCTTGTACCTCTCTGTTTCTTGCTATTGCTTCGTGGTGGACATTGTTGTTATATCAGAGAGACGCGTTGCTTTGCCAACTCAGTACTTGGTTTGTGATGTGGTTTTCACTTGTGTTGGTTTGTTATTCTGTTACGTGGGGTATTTTGTGAAAAGCAAAGGCCACGTTCGAGAAAAAGAAAATAACGGTATTCAGGAACCTCTTTTGAATGGTGGCACAAATGAGGATGATGTCTTGAGATCAAAAGAGAACAGGGGTGGGGACACTGTTACGCCTTTCTCATATGCTGGCATTCTGAGCCTTCTTACCTTCTCTTGGGTGGGTCCTCTTATAGCTGTTGGCAATAAGAAGACCCTCGACCTTGAGGATGTTCCTCAACTAGACAGCAGAGACAGTGTTGTTGGAGCTTTTCCTGGGTTCAGAGATAAACTTGAGGCTGATTGTGGCACAATCAATAGTGTCACCACACTTAAGTTGGTGAAGTCGTTAGTGATGTCAGCGTGGAAGGAGATTCTTTTCACAGCTTTTCTTGCACTGTTAAACACTTTGGCTTCTTATGTTGGTCCTTATCTTATTGACAGTTTTGTTCAGTACCTTAATGGACAACGGCTATATGAAAACCAGGGCTATGTTTTGGTCTGTGCTTTTTTCTTTGCAAAGATTGTAGAGTGTCTGACTCAAAGGCATTGGTTCTTTAGGTTGCAGCAAGTTGGACTTCGAGTTCGTGCACTACTTGTCACGATGATCTATAACAAGGCTTTGACCCTTTCTTGTCAGTCAAAGCAGGGTCAGACTTCTGGAGAAATAATCAATTTCATGACCGTTGATGCTGAAAGAGTTGGTGTCTTCAGTTGGTATATGCATGATTTGTGGATGGTGGCTTTGCAAGTTACATTGGCCTTGTTGATTTTGTATAAAAATCTTGGGCTGGCTTCAATTGCTGCTTTTGTTGCAACTATCCTTGTTATGCTGGCAAATGTTCCCTTGGGATCATTGCAAGAGAAATTTCAGAAGAAGTTGATGGAGTCGAAAGATGCAAGAATGAAGGCCACATCCGAGATTTTAAGGAATATGAAGATTCTCAAACTACAAGGATGGGAAATGAAGTTTCTAGCAAAAATAACTGAGCTCAGGAAAACTGAGCAAGGCTGGTTAAAAAAGTTTGTCTATACTGCAGCCATGACGACGTTTGTGTTTTGGGGTGCCCCCACATTTGTATCTGTGGTTACTTTTGGTACTTGTATGATTATAGGGATCCCCCTTGAATCAGGGAAGATATTGTCTGCACTTGCCACATTCCGAATTCTCCAAGAGCCCATTTATGGCCTTCCAGATACAATTTCGATGATAGCACAAACTAAAGTGTCTCTTGATAGGATTGCATCATTCCTTCGTCTGGATGACTTACCCTCTGATGTTGTAGAGAAGCTTCCTCGTGGTAGTTCTGATTCAGCAATTGAAGTGGTTGATGGAAACTTTTCTTGGGAGTTATCTTCTCCTAACCCAACATTACAAAATATAAATCTTAAAGTTTTTCACGGGATGAGGGTGGCAGTTTGTGGTACTGTTGGATCAGGCAAATCTACTTTACTTTCTTGTGTATTGGGAGAAGTACCTAAGATATCAGGCATCCTTAAGGTTTGTGGAACAAAGGCCTATGTTACACAATCTCCATGGATACAGAGTGGCAAGATTGAGGATAATATATTGTTTGGAAAACAAATGGACAGGGAAAAGTACGAGAAGGTACTTGAGGCCTGTTCCCTGAAGAAGGATCTGGAGATTTTGTCATTTGGTGATCAGACAGTCATAGGAGAGCGTGGAATAAATTTGAGTGGTGGACAAAAACAAAGGATACAAATTGCACGTGCACTTTACCAAGATGCTGATATATATCTATTTGATGACCCTTTTAGTGCAGTGGATGCTCACACAGGCTCTCACCTCTTTAAGGAATGCTTGTTGGGCCTTTTATGTTCAAAGACAGTGGTTTATGTCACACATCAAGTAGAATTCTTACCTGCTGCAGATCTTATAGTGGTCATGAAAAACGGGAAAATTACTCAATGTGGAAAGTATGCTGATCTGCTTAATAGTGGAGCTGATTTTATGGAACTTGTTGGTGCACACAAAAAGGCTTTGTCTACACTAGATTCATTAGATGGAGCAACAGTACCTAACGAAATAAGCACCTTGGAACAAGATTTAAATGTCTCTGGCATGCACGGTTTTAAAGAGGAGTCAAGCAAAGATGAACAAAATGGTGAAACAAACAAGAGTGAACCTCAAGGCCAACTTGTTCAGGAAGAAGAAAGGGAGAAAGGTAAAGTTGAGTTTTCAGTCTATTGGAAATGTATCACGACAGCATATGGAGGAGCTCTTGTGCCATTCATATTGTTGGCTCAGATTCTTTTTCAAGGTCTTCAAATCGGAAGCAATTATTGGATGGCTTGGGCGACTCCCATCTCAACCGATGTGGAACCACCTGTTGAAGGAACGACTCTTATTGTGGTTTATGTTTGTTTGGCCATTGGAAGTTCTTTCTGCATCCTTGCCAGAGCAATGCTTCTTGTTACTGCTGGTTATAAGACAGCTACTATTCTCTTCAATAAAATGCACTTCTGTATTTTCCGTGCTCCAATGTCATTTTTCGATTCCACTCCAAGTGGGCGAATCCTTAATAGAGCTTCAACGGATCAGAGTGCATTGGATACAGAGATTCCTTATCAAATTGCATCATTTGCCTTCATTGTGATCCAACTTCTGGGAATTATAGGAGTGATGTCTCAGGCTGCATGGCAAGTTTTCGTAGTCTTTATACCTGTAATCGCAGTCAGCCTCTGGTATCAGCAATATTATATTCCAGCAGCTCGAGAACTGTCACGTTTAGTTGGTGTCTGCAAAGCCCCAAACATTCAACACTTTTCTGAAACAATTTCTGGTACTTCAACCATTAGAAGCTTTGATCAGCAATCAAGATTTCAGGAAACAAATATGAAGCTGACTGATGGGTATTCTCGGCCAAAGTTCAATATTGCTGGTGCCATGGAATGGTTGTGCTTCCGCCTAGATATGTTGTCTTCTATCACATTTGCCTTTTCCTTAATATTTTTAATATCTATTCCAGCGGGACTCATAGATCCAGGCCTTGCTGGTTTAGCGGTTACCTATGGACTAAATTTGAACATGATACAAGCTTGGATGATATGGAATCTATGCAATATGGAGAATAAAATTATATCAGTGGAAAGGATACTTCAGTATACTTGTATTCCTAGTGAACCTCCCCTTCTTGTAGATGAAAATCGGCCAGATCCTTCTTGGCCCTCAAATGGCGAGGTTGATATTCAAGATTTGCAGGTTCGTTACGCTCCACATCTTCCACTTGTGCTGCGTGGTATTACGTGCAAATTTCCTGGAGGACTGAAAACTGGCATTGTTGGGAGAACAGGAAGTGGTAAATCCACTCTCATACAAACGCTTTTCCGAATTGTTGAGCCTGCTGCTGGGCAAATTATGATAGACAACATCAACATCTCTTCAATTGGACTTCATGATTTGAGGTCTAGACTAAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGAACAGTAAGAAATAATCTGGACCCCCTGGAAGAATACACTGATGATCAAATTTGGGAGGCCTTGGATAAATGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTTGATTCCAAAGTCAGTGAGAATGGTGAGAATTGGAGTATGGGTCAGAGACAGTTGGTCTGCCTTTGGAGGGTTCTGCTAAAGAAAAGCAAGGTTTTGGTTCTTGATGAAGCCACTGCATCAGTTGATACAGCTACGGATAATTTGATTCAGCAAACTCTTAGGCAACATTTCACTGACTCCACAGTTATTACCATTGCACACCGAATAACTTCAGTTCTTGACAGTGATATGGTTCTGCTTCTTAGTCAAGGACTTATTGAGGAGTATGACACCCCAACAAAATTGCTAGAGAATAAGTCATCATATTTTGCTCGACTTGTTGCTGAGTATACCATGAGTTTCAACTCCAATTTTGAGAAATCTGATGATCACTGA 4497 0.4147 MLSYIHLSNDVLLQPVFLHCLSGFLHLLLLVAVPLSLVWKNFTTRVRDESKEKHDDTLFKTTVFCSLGVSAFSFLLCLFSYFYWYSSGWSEEELVTLLDLVLKTVAWGVVCVCLNKGFFSSGERRFSFLFRAWCVLYLSVSCYCFVVDIVVISERRVALPTQYLVCDVVFTCVGLLFCYVGYFVKSKGHVREKENNGIQEPLLNGGTNEDDVLRSKENRGGDTVTPFSYAGILSLLTFSWVGPLIAVGNKKTLDLEDVPQLDSRDSVVGAFPGFRDKLEADCGTINSVTTLKLVKSLVMSAWKEILFTAFLALLNTLASYVGPYLIDSFVQYLNGQRLYENQGYVLVCAFFFAKIVECLTQRHWFFRLQQVGLRVRALLVTMIYNKALTLSCQSKQGQTSGEIINFMTVDAERVGVFSWYMHDLWMVALQVTLALLILYKNLGLASIAAFVATILVMLANVPLGSLQEKFQKKLMESKDARMKATSEILRNMKILKLQGWEMKFLAKITELRKTEQGWLKKFVYTAAMTTFVFWGAPTFVSVVTFGTCMIIGIPLESGKILSALATFRILQEPIYGLPDTISMIAQTKVSLDRIASFLRLDDLPSDVVEKLPRGSSDSAIEVVDGNFSWELSSPNPTLQNINLKVFHGMRVAVCGTVGSGKSTLLSCVLGEVPKISGILKVCGTKAYVTQSPWIQSGKIEDNILFGKQMDREKYEKVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLCSKTVVYVTHQVEFLPAADLIVVMKNGKITQCGKYADLLNSGADFMELVGAHKKALSTLDSLDGATVPNEISTLEQDLNVSGMHGFKEESSKDEQNGETNKSEPQGQLVQEEEREKGKVEFSVYWKCITTAYGGALVPFILLAQILFQGLQIGSNYWMAWATPISTDVEPPVEGTTLIVVYVCLAIGSSFCILARAMLLVTAGYKTATILFNKMHFCIFRAPMSFFDSTPSGRILNRASTDQSALDTEIPYQIASFAFIVIQLLGIIGVMSQAAWQVFVVFIPVIAVSLWYQQYYIPAARELSRLVGVCKAPNIQHFSETISGTSTIRSFDQQSRFQETNMKLTDGYSRPKFNIAGAMEWLCFRLDMLSSITFAFSLIFLISIPAGLIDPGLAGLAVTYGLNLNMIQAWMIWNLCNMENKIISVERILQYTCIPSEPPLLVDENRPDPSWPSNGEVDIQDLQVRYAPHLPLVLRGITCKFPGGLKTGIVGRTGSGKSTLIQTLFRIVEPAAGQIMIDNINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDDQIWEALDKCQLGDEVRKKEGKLDSKVSENGENWSMGQRQLVCLWRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFTDSTVITIAHRITSVLDSDMVLLLSQGLIEEYDTPTKLLENKSSYFARLVAEYTMSFNSNFEKSDDH* 1499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1735 1498 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 931 1211 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu8g1735 1498 CDD ABC_6TM_ABCC_D2 929 1223 IPR044726 GO:0140359
Pvu8g1735 1498 ProSitePatterns ABC transporters family signature. 745 759 IPR017871 GO:0005524
Pvu8g1735 1498 SMART AAA_5 647 820 IPR003593 -
Pvu8g1735 1498 SMART AAA_5 1274 1467 IPR003593 -
Pvu8g1735 1498 Gene3D ABC transporter type 1, transmembrane domain 285 602 IPR036640 GO:0005524|GO:0016021
Pvu8g1735 1498 Gene3D ABC transporter type 1, transmembrane domain 891 1229 IPR036640 GO:0005524|GO:0016021
Pvu8g1735 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 617 842 IPR027417 -
Pvu8g1735 1498 Gene3D - 606 854 IPR027417 -
Pvu8g1735 1498 Pfam ABC transporter transmembrane region 931 1173 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu8g1735 1498 Pfam ABC transporter transmembrane region 306 573 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu8g1735 1498 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1248 1482 IPR003439 GO:0005524
Pvu8g1735 1498 Gene3D - 1231 1484 IPR027417 -
Pvu8g1735 1498 CDD ABCC_MRP_domain2 1246 1466 - -
Pvu8g1735 1498 MobiDBLite consensus disorder prediction 879 905 - -
Pvu8g1735 1498 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 78 1494 - -
Pvu8g1735 1498 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 78 1494 - -
Pvu8g1735 1498 CDD ABCC_MRP_domain1 620 820 - -
Pvu8g1735 1498 CDD ABC_6TM_ABCC_D1 307 594 IPR044746 GO:0140359
Pvu8g1735 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1239 1478 IPR027417 -
Pvu8g1735 1498 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 306 586 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu8g1735 1498 Pfam ABC transporter 638 772 IPR003439 GO:0005524
Pvu8g1735 1498 Pfam ABC transporter 1265 1413 IPR003439 GO:0005524
Pvu8g1735 1498 SUPERFAMILY ABC transporter transmembrane region 930 1230 IPR036640 GO:0005524|GO:0016021
Pvu8g1735 1498 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 620 843 IPR003439 GO:0005524
Pvu8g1735 1498 SUPERFAMILY ABC transporter transmembrane region 296 606 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1735 Pvu-Chr8 43357813 43363432 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1735 620 850 Calmodulin-binding Proteins AT2G36910 30.315 1.13e-23 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1735 - K05666 gmx:100777836 2578.13