Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1734 ATGTTGTCTCTTTTCTTGCCCTTTACCCACATACACCTTTCCAACGATGTTCTCCTCCAACCCGTTTTCCCTCATGGCTTATCCGGCTTCCTCCACCTTCTGTTGCTCGTCGCGGTTTCATTGTCATGGGTTTGGAAGAAATTCACGACACGTGTCAGGAATGAGTCTAAGGAGAAGCTCGACAACACCCTCTTTAAAACGACCGTGTTTTGTTCTCTGGGTGTTTCTGCTTTCAGTTTTCTCCTCTGTTTGTTCAATTACTTCTACTGGTACTCTAGTGGCTGGTCAGAAGAAGAGCTCGTGACCCTTTTGGATTTGGTGCTCAAAACAGTTGCCTGGGGCGTTGTTTGTGTTTGCTTGAACAAGGGCTTCTTCAGTTCAGGCGAGAGAAGGTTCTCATTCCTCTTCAGAGCTTGGTGCGTCTTGTACCTCTCTGTTTCTTGCTATTGCTTCGTGGTGGACATTGTTGTTATATCAGAGAGACGCGTTGTTTTGCCAACACAGTACTTGGTTTCTGATGTAGTTTCCACTTGTGTTGGTTTGTTATTCTGTTACGTGGGGTATTTTGTGAAAAGCAAAGGCCACGTTCGAGAAAAAGAAAATAACGGTATTCAGGAACCTCTTTTGAATGGTGGCACAAATGAGGATGATGTCTTGAGATCAAAAGAGACCAGGGGAGGGGACACTGTTACGCCTTTCTCATATGCTGGCATTCTTAGCCTTCTTACCTTCTCTTGGGTGGGTCCTCTTATAGCTGTTGGCAATAAGAAGACCCTCGACCTTGAGGATGTTCCTCAACTAGACAGCAGAGACAGTGTTGTTGGAGCTTTTCCTGGGTTCAGAGATAAACTTGAGGCTGATTGTGGCATAATAAATAATGTCACCACACTTAAGTTGGTGAAGTCGTTAGTGATGTCAGCGTGGAAGGAGATTCTTTTCACAGCTTTTCTTGCACTGTTAAACACTTTGGCTTCTTATGTTGGTCCTTATCTTATGGATGGTTTTGTTCAGTACCTTGATGGACAACGGCTTTATGAAAACCAGGGCTATGTTTTGATTTCGGCTTTTCTCTTTGCAAAGATGGCAGAGTGTCTGTCTCAATTGCATCGGTGCTTTAGGTTGCAGCAAGTTGGACTTCGAATGCGTGCACTGCTTGTCACGATGATCTACAACAAGGCTCTGACCCTTTCTTGTCAATCCAAGCATGGCCACACTTACGGGGAAATAATCAATTTCATGGCTGTTGATGCTGAAAGAGTTGGTGCCTTTAGTTGGTATATACATGATTTGTGGATGGTGGCCTTGAAAGTTACATTGGCCTTTTTGATTTTGAAAACTGAGCAAGGCTGGTTGAAAAAAGGTGCCTATATTGCAGCCATGAGCTCGTTTTTGTTTAGGGGTGGCCCCACATTTGTAGCCGTGGTTACTTTCGGTACTTGTATGCTTGGAGGGGTCCCCCTTGAATCAGGGAAGATCTTGTCTGCACTAGCAACATTTGGGATTCTTCAGGAGCCCATTTATAACCTTCCAGATACAATTTCGATGATAGCACAAACTAAAGTATCTCTTGATAGGATTGCATCATTCCTTCGTCTGGATGACTTACCCTCTGATGTTGTAGAGAAGCTTCCCCGGGGAAGTTCTGATACAGCAATTGAAGTAGTTGGTGGAAACTTTTGTTGGGAATTATCTTCCCCTAACCCAACATTACAAAATATAAATCTTAAAGTTTTCAATGGGATGAAGGTTGCAGTTTGTGGTACTGTTGGATCAGGCAAGTCTACATTCCTTTCTTGTTTATTAGGAGAAGTACCAAAGATATCAGGCATCCTTAAGATTGAGGATAATATATTGTTTGGCAAACAAATGGATAGGGAAAAGTATGAGAAGGTACTTGAAGCGTGTTCCCTGAAGAAGGATCTGGAGATTTTGTCATTTGGTGATCAGACAGTCATAGGAGAGCGTGGAATAAATTTGAGTGGTGGACAAAAACAAAGAATACAAATTGCACGTGCACTTTACCAAGATGCTGATATATATCTGTACCGGCAGGCACCGGACGAACACACGGCATTTATGTGGCAAACTAAGGTGGTTAAGATACACCTCCGAAAAATAAGGAGAACGCGCTTAGAGAAGATATGTTCTCCGGGTATTCCGGGGCATGACTTGCAAGACTCATCCATAACCACCCTGAGCCCAAGGGACAGAAAGCCCATTAGGCAATCCTATAAATACTGTGCTCAAGTCAAAGAAAGGTACGTTTTTCATCCACCTACTAAATCACACTTAGAATCTCTCACTTACTTGAGCGTCGGAGTGCCTTCACAGGTATCCTCCCCCGACCGAAGGAGACACCAAGAAGGAACGACCGAAGAAGAGGAAGATCGATACGTACAATATCTATTCGATGATCCTTTCAGTGCTTTGGATGCTCACACAGGCTCTCACCTCTTCAAGGAATGCTTGTTGGGCCTTTTAAGTTCAAAAACAGTGGTTTATGTCACTCATCAAGTGGAGTTCTTACCTGCTGCTGACCATATATTGGTTATGAAAGATGGGAAAATTACTCAATGTGGAAAGTATACTGATTTGCTTAATTATGGAGCTGATTTTATGGAACTTGTTGGTGCACATAAAAAAGCTTTGTCTACGCTAGATTCTTTGGATGGAGCAACAGTATGTGATGAAATAAGCACCTTGGAACAACATGTAAATGTCTCTGGCACGCAAGGTTCTAAAGAGGAGGCAAGTAAAGATGAGCAAAATGGTAAAACAATTAAAAGTGAACCAAAAGTTCAGTTTGTTCCGAAAGAAGAAAGAGTGAAAGGTAAAGTTGGCTTTTCAGTGTATTGGAAATGCATCACAACAGCATATGGAGGAGCTCTTGTACCATTCATATTGTTAGCTCAGATTCTTTTTCAAGTTCTTCAAATTGGCAGCAATTATTGGATGGCTTGGGCGACTCCCATCTCAGCAGATGTGGTTCCACCTGTTGAAGGAACAACTCTTATAGTAGTCTATGTTAGTTTGGCTATTGGAAGTTCTTTATGCATCCTTGCCAGAGCAATGCTTCTTGTCACAACTAGTTACAAAACAGCTACCATACTCTTCAGTAAAATGCACTATTGCATTTTCCGTGCTCCAATGTCATTTTTTGATTCCACTCCAAGTGGGCGTATCCTTAACAGAGTTTCAACGGATCAAAATGCATTGGATACAAATATTCCTCATCAAATTGCATCATTTGCCTTCATTATGATCCAACTTCTGGGAATTATAGCAGTGATGTCTCAGGCTGCATGGCAAGTTTTAGTTGTCTTTATACCTGTGATTATAGTCTGCATTTGCTATCAGCAATATTATATTCCATCAGCCAGAGAACTATCACGTTTAGTTGGAGTCTGCAAAGCCCCACTCATACAACACTTTTCTGAAACAATTTCTGGTACTTCAACCATTAGAAGCTTTGATCAGCAATCAAGATTTCAGGAAACAAATATGAAACTGACTGATGGGTATTCTCGGCCAAAGATCAACATTGCTTGTGCCATGGAATGGTTGTGCTTCCGCTTAGATATGTTGTCTTCTATCATATTTGCCTTTTCCTTAATATTCATAATATCTATTCCACCGGGATTCATAGATCCAGGCCTTGCTGGTTTAGCCGTTACATACGGGCTAAATTTGAACAATATACAAGCTTGGATGATATGGAATCTATGCAAAATGGAGAGCAAAATTAGATCAGTAGAGAGAATACTTCAGTATACTTCTATTCCCAATGAGCCTCCCCTTGTTATAGATGAAAATCAGCCAAATCCTTCTTGGCCCTCAAATGGCGAGATCGATATACAAGATCTGCAGGTTCGGTATGCTCCTCATCTTCCACTTGTGTTGTGTGGAAGTGGTAAATCCACCCTCATACAAACGCTTTTTCGAATTGTTGAGCCTGCTGTTGGGCAAGTTATGATTGACAACATCAACATCTCTTCAATTGGACTTCATGATTTGAGGTCTAGACTAAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGAACAGTAAGAAATAATATGGACCCCCTGGAAGAATACACTGATGATCAAATTTGGGAGGCCTTGGACAAATGTCAACTTGGAGACGAAGTTAGAAGGAAAGAAGGAAAGCTTGACTCCAAAGTCAGTGAGAATGGTGAGAATTGGAGTATGGGTCAGAGACAGTTGGTCTGCCTTGGCAGGGTTCTGCTTAAGAAAAGCAAGGTTTTGGTTCTTGATGAAGCCACTGCATCTGTGGATACAGCTACGGATAATTTGATTCAGCAAACTCTTAGGCAACATTTCACTGACTCCACAGTTATTACCATTGCACACCGAATAACTTCAGTTCTTGACAGTGATATGGTTCTGCTTCTTAGTCAAGGACTTATTGAGGAGTATGACACCCCAACAAGGTTGCTAGAGAACAAGTCATCATCTTTTTCTCAACTTGTTGCTGAATACACCGTGAGGTCCAACTCCAGTTTGGACAAATCCGATAATCACTGA 4548 0.4189 MLSLFLPFTHIHLSNDVLLQPVFPHGLSGFLHLLLLVAVSLSWVWKKFTTRVRNESKEKLDNTLFKTTVFCSLGVSAFSFLLCLFNYFYWYSSGWSEEELVTLLDLVLKTVAWGVVCVCLNKGFFSSGERRFSFLFRAWCVLYLSVSCYCFVVDIVVISERRVVLPTQYLVSDVVSTCVGLLFCYVGYFVKSKGHVREKENNGIQEPLLNGGTNEDDVLRSKETRGGDTVTPFSYAGILSLLTFSWVGPLIAVGNKKTLDLEDVPQLDSRDSVVGAFPGFRDKLEADCGIINNVTTLKLVKSLVMSAWKEILFTAFLALLNTLASYVGPYLMDGFVQYLDGQRLYENQGYVLISAFLFAKMAECLSQLHRCFRLQQVGLRMRALLVTMIYNKALTLSCQSKHGHTYGEIINFMAVDAERVGAFSWYIHDLWMVALKVTLAFLILKTEQGWLKKGAYIAAMSSFLFRGGPTFVAVVTFGTCMLGGVPLESGKILSALATFGILQEPIYNLPDTISMIAQTKVSLDRIASFLRLDDLPSDVVEKLPRGSSDTAIEVVGGNFCWELSSPNPTLQNINLKVFNGMKVAVCGTVGSGKSTFLSCLLGEVPKISGILKIEDNILFGKQMDREKYEKVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLYRQAPDEHTAFMWQTKVVKIHLRKIRRTRLEKICSPGIPGHDLQDSSITTLSPRDRKPIRQSYKYCAQVKERYVFHPPTKSHLESLTYLSVGVPSQVSSPDRRRHQEGTTEEEEDRYVQYLFDDPFSALDAHTGSHLFKECLLGLLSSKTVVYVTHQVEFLPAADHILVMKDGKITQCGKYTDLLNYGADFMELVGAHKKALSTLDSLDGATVCDEISTLEQHVNVSGTQGSKEEASKDEQNGKTIKSEPKVQFVPKEERVKGKVGFSVYWKCITTAYGGALVPFILLAQILFQVLQIGSNYWMAWATPISADVVPPVEGTTLIVVYVSLAIGSSLCILARAMLLVTTSYKTATILFSKMHYCIFRAPMSFFDSTPSGRILNRVSTDQNALDTNIPHQIASFAFIMIQLLGIIAVMSQAAWQVLVVFIPVIIVCICYQQYYIPSARELSRLVGVCKAPLIQHFSETISGTSTIRSFDQQSRFQETNMKLTDGYSRPKINIACAMEWLCFRLDMLSSIIFAFSLIFIISIPPGFIDPGLAGLAVTYGLNLNNIQAWMIWNLCKMESKIRSVERILQYTSIPNEPPLVIDENQPNPSWPSNGEIDIQDLQVRYAPHLPLVLCGSGKSTLIQTLFRIVEPAVGQVMIDNINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNMDPLEEYTDDQIWEALDKCQLGDEVRRKEGKLDSKVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFTDSTVITIAHRITSVLDSDMVLLLSQGLIEEYDTPTRLLENKSSSFSQLVAEYTVRSNSSLDKSDNH* 1516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1734 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1273 1491 IPR027417 -
Pvu8g1734 1515 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 530 878 IPR003439 GO:0005524
Pvu8g1734 1515 Gene3D ABC transporter type 1, transmembrane domain 926 1264 IPR036640 GO:0005524|GO:0016021
Pvu8g1734 1515 CDD ABC_6TM_ABCC_D1 313 526 IPR044746 GO:0140359
Pvu8g1734 1515 SUPERFAMILY ABC transporter transmembrane region 302 538 IPR036640 GO:0005524|GO:0016021
Pvu8g1734 1515 SMART AAA_5 1294 1484 IPR003593 -
Pvu8g1734 1515 SMART AAA_5 579 855 IPR003593 -
Pvu8g1734 1515 MobiDBLite consensus disorder prediction 906 929 - -
Pvu8g1734 1515 Pfam ABC transporter 570 681 IPR003439 GO:0005524
Pvu8g1734 1515 Pfam ABC transporter 1302 1430 IPR003439 GO:0005524
Pvu8g1734 1515 Gene3D - 1266 1501 IPR027417 -
Pvu8g1734 1515 Gene3D ABC transporter type 1, transmembrane domain 298 447 IPR036640 GO:0005524|GO:0016021
Pvu8g1734 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 552 682 IPR027417 -
Pvu8g1734 1515 CDD ABC_6TM_ABCC_D2 964 1258 IPR044726 GO:0140359
Pvu8g1734 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 801 877 IPR027417 -
Pvu8g1734 1515 ProSitePatterns ABC transporters family signature. 659 673 IPR017871 GO:0005524
Pvu8g1734 1515 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 966 1246 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu8g1734 1515 Gene3D - 539 693 IPR027417 -
Pvu8g1734 1515 Gene3D - 799 890 IPR027417 -
Pvu8g1734 1515 MobiDBLite consensus disorder prediction 775 795 - -
Pvu8g1734 1515 MobiDBLite consensus disorder prediction 914 929 - -
Pvu8g1734 1515 MobiDBLite consensus disorder prediction 781 795 - -
Pvu8g1734 1515 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1255 1499 IPR003439 GO:0005524
Pvu8g1734 1515 SUPERFAMILY ABC transporter transmembrane region 965 1265 IPR036640 GO:0005524|GO:0016021
Pvu8g1734 1515 CDD ABCC_MRP_domain2 1281 1483 - -
Pvu8g1734 1515 Pfam ABC transporter transmembrane region 966 1206 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu8g1734 1515 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 312 444 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu8g1734 1515 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 84 444 - -
Pvu8g1734 1515 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 445 684 - -
Pvu8g1734 1515 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 801 1511 - -
Pvu8g1734 1515 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 801 1511 - -
Pvu8g1734 1515 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 445 684 - -
Pvu8g1734 1515 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 84 444 - -
Pvu8g1734 1515 CDD ABCC_MRP_domain1 552 855 - -
Pvu8g1734 1515 Gene3D ABC transporter type 1, transmembrane domain 448 532 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1734 Pvu-Chr8 43348939 43355421 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1734 472 685 Calmodulin-binding Proteins AT2G36910 26.482 4.26e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1734 - K05666 pvu:PHAVU_008G167300g 2910.55