Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1728 ATGGAGTACATGTCATCTCATATGGGTTCACTTGCATTGACAGATGGGGCATCAATTGGATTCAATCAACATGTTAAACACCATAATATGCTGCAGGCAGAGTCTGAGACTAGTTTGTTATCTGAGGGAGGCAAGAGTTCTCTTCTTCCAAAGAGAAGAATAGTTACTCAGGATCATCTGCAGCAATTCAAAAACTTTTTGAGTCAACCAGCTACACAATCTTCCACAGTGGGATTGCCATGTCTTACAACTACATCAGTGCATTCAACTTCAGCTCCAATGTTGAATTCTATACCTCACTGTTCTAATTCCTGTATGGATAGTGACTCGCATGTGGCTGCAGAACCTTATGATAACCTGAATGTCAATCCTCATCCTGTAACACAAAGGGTTGTTAAATCACCATATGATTCTCTGAAGGACACCAATAGAATGTTAATTGATGCAGAGTTGACATTTAAGCAGAGTGATCTATCTAAGGAGCAACAAGGATGTTTATTAAAGGAAACTAGTATTTCAAAATATACTTCTCGTTGTGATGACATGTTAAGTAAAGGGGAAGAGTCTGCAGCTGTTACCAACATACTGCCTCAGGCTCTGACTTCATCTTCAAATACGAATCTGGAATCTTCTAGCTTAGAAAAACAAGAAAAAAATGCAAGTTGTAAAGGACCTTCGGTCACACGGAAGAGGACCTATGACCCTGAGTTGTTTTTTAAAGTCAATGGCAAGCTTTATCAAAGGCTTGGCAAGATAGGCAGTGGTGGAAGCAGTGAGGTGCACAAAGTGATTTCATCAGACTGTACTATCTATGCACTTAAAAAAATAAAACTAAAGGGTCATGATTATGCCACTGCGTACAGCTTTTGTCAGGAGATCGAGTATCTAAATAGGCTGAAAGGAAAGAATAATATTATCCAGCTTATGGATTATGAGGTACTAATGAAGAAGATGAAGCATTGGATTTGA 969 0.3891 MEYMSSHMGSLALTDGASIGFNQHVKHHNMLQAESETSLLSEGGKSSLLPKRRIVTQDHLQQFKNFLSQPATQSSTVGLPCLTTTSVHSTSAPMLNSIPHCSNSCMDSDSHVAAEPYDNLNVNPHPVTQRVVKSPYDSLKDTNRMLIDAELTFKQSDLSKEQQGCLLKETSISKYTSRCDDMLSKGEESAAVTNILPQALTSSSNTNLESSSLEKQEKNASCKGPSVTRKRTYDPELFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGHDYATAYSFCQEIEYLNRLKGKNNIIQLMDYEVLMKKMKHWI* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1728 322 MobiDBLite consensus disorder prediction 202 226 - -
Pvu8g1728 322 Gene3D Phosphorylase Kinase; domain 1 239 321 - -
Pvu8g1728 322 MobiDBLite consensus disorder prediction 202 227 - -
Pvu8g1728 322 SUPERFAMILY Protein kinase-like (PK-like) 227 314 IPR011009 -
Pvu8g1728 322 ProSiteProfiles Protein kinase domain profile. 246 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1728 322 PANTHER MIXED LINEAGE PROTEIN KINASE 26 316 - -
Pvu8g1728 322 Pfam Protein kinase domain 246 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1728 322 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 26 316 IPR027084 GO:0004712|GO:0007093|GO:0051304
Pvu8g1728 322 ProSitePatterns Protein kinases ATP-binding region signature. 252 274 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1728 Pvu-Chr8 43026955 43031354 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Pvu8g1728 Pkinase 1.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1728 K08866 - pvu:PHAVU_008G166700g 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1728 8 43026955 43031354 Pvu8g1728 8 43026955 43031354 ECH