Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1710 ATGGTTAAGCCTGAGAACAAGATCCACACAGAATCATCAAAGCCATTGAGAGCACTATCTTCCTCATCATCACCACCATTAAGTGACAGCAAGAAGAAGTACAAGGGAGTGAGAATGAGAAGCTGGGGCTCATGGGTGTCAGAGATTAGAGCACCAAACCAAAAAACTAGAATATGGTTGGGATCTTATTCAACTGCTGAGGCAGCAGCAAGAGCCTATGATGCTGCACTACTTTGCCTTAAGGGCTCCTCAGCCAATCTCAACTTCCCTTCAAGCTCCTCACACTACATTCCTCAAGACACTCTCATGTCCCCAAAATCAATCCAAAGAGTGGCTGCAGCTGCTGCCAACAATTTTTTGGACAATGCTATTGTTGCTACCACCCCATCTTCTCCACCTTCTCCTCCTCTTGCTTCAACCTCTTCCTCTTCATTGGTCTCTTCCCCTTCAATGTCATCATCTCCCTCAGACCAAATTGATGATGATGTCTCACTTCTGTCACCATTTGGGGCCTACATTCCTCCTCCCCCTACTATTAACTGTGATCAACCAAATGATTCAATGGCTATGATGGAATCTTGGTATGGCTTGGAGGAGTTACAATCCCCAAAATATGTTGAGCAAATGCTAAGTGGGGCATTCTTTGACATTGATTCAACACAGTTGCTTGATGATCTGTATGAAGAAAGTGATATCCGTTTGTGGAGCTTCTGCTGA 717 0.4463 MVKPENKIHTESSKPLRALSSSSSPPLSDSKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANLNFPSSSSHYIPQDTLMSPKSIQRVAAAAANNFLDNAIVATTPSSPPSPPLASTSSSSLVSSPSMSSSPSDQIDDDVSLLSPFGAYIPPPPTINCDQPNDSMAMMESWYGLEELQSPKYVEQMLSGAFFDIDSTQLLDDLYEESDIRLWSFC* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1710 238 MobiDBLite consensus disorder prediction 1 35 - -
Pvu8g1710 238 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 238 - -
Pvu8g1710 238 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 11 238 - -
Pvu8g1710 238 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Pvu8g1710 238 SUPERFAMILY DNA-binding domain 33 91 IPR016177 GO:0003677
Pvu8g1710 238 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Pvu8g1710 238 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Pvu8g1710 238 CDD AP2 32 92 IPR001471 GO:0003700|GO:0006355
Pvu8g1710 238 MobiDBLite consensus disorder prediction 137 159 - -
Pvu8g1710 238 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Pvu8g1710 238 Gene3D AP2/ERF domain 32 91 IPR036955 GO:0003700|GO:0006355
Pvu8g1710 238 Pfam AP2 domain 33 82 IPR001471 GO:0003700|GO:0006355
Pvu8g1710 238 MobiDBLite consensus disorder prediction 13 29 - -
Pvu8g1710 238 MobiDBLite consensus disorder prediction 127 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1710 Pvu-Chr8 42621369 42622218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1710 1 237 AP2-EREBP Transcription Factor Family AT1G21910 45.385 3.67e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu8g1710 AP2 5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1710 - - gmx:100813313 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1710 8 42621369 42622218 Pvu8g1710 8 42621369 42622218 ECH