Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1705 ATGCAGGCAAAATTTCTAACGCTTGTTCATCATAGAAATGTGGTTTCTCTTGTGGGGTATTGTGATGAAGAAGATGCTAAAGCACTTATTTACGAATATCTTTCAAAGGGAAATCTCCAAGAACAATTCAGTAAAGCTTATTTTGTAGATAAAAGCTCAAGTGTCTTGGGATGGAAAGAGAGAGTTCAAATTGCCTTAGATGCAGCAAGTGGATTGGATTATCTGCATAATGGATGTAAGCCACCTATTATTCATAGAGATTTGAAAGGTTCCAACATCCTAGTAGATGAAAACATGCATGCCAAGATTTCAGACTTTGGATTGTCTAGAACTTTTGCAAATGATAGTGACACTCATGTCTTAACTAATTATCCAGGTGGCACACCAGGTTACATTGATCCTGAGTATCACTCCTCTGGGACTCTTAATAAAAGAAGTGATGTGTACAGTTTTGGGGTAATTTTGTTAGAGCTAATTACAGGTCAAGCAGCAATAAGAGGAACTCCTGAGAAACCTAGTCACATACATTCTTGGGTTAAACCCAAACTTGAAGCTGGAGATATCCAAGCAATGGTTGATCCAAGATTAGAAGGAAATTACAATGTTGCTTCAGCTTGGAAATTTTTGGATATAGCCATGTCTTGCCTTCCTGATGTTGCCATTCAAAGGCCTGACATAAGCCACATAACCTCAGAACTCAAGGATTGTTTGTCTTTGGAACTATCCCTTCAAAGGACTGTCACCAACAACAACATACATTCATTCCTCATGGATTCTATGCTCATTGATTTCAATGAATCTGATATAGGTCCATATCCTAGGTAG 825 0.3806 MQAKFLTLVHHRNVVSLVGYCDEEDAKALIYEYLSKGNLQEQFSKAYFVDKSSSVLGWKERVQIALDAASGLDYLHNGCKPPIIHRDLKGSNILVDENMHAKISDFGLSRTFANDSDTHVLTNYPGGTPGYIDPEYHSSGTLNKRSDVYSFGVILLELITGQAAIRGTPEKPSHIHSWVKPKLEAGDIQAMVDPRLEGNYNVASAWKFLDIAMSCLPDVAIQRPDISHITSELKDCLSLELSLQRTVTNNNIHSFLMDSMLIDFNESDIGPYPR* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1705 274 PANTHER OS07G0107800 PROTEIN-RELATED 3 250 - -
Pvu8g1705 274 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 3 250 - -
Pvu8g1705 274 SMART serkin_6 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1705 274 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Pvu8g1705 274 SUPERFAMILY Protein kinase-like (PK-like) 4 232 IPR011009 -
Pvu8g1705 274 Pfam Protein tyrosine and serine/threonine kinase 3 232 IPR001245 GO:0004672|GO:0006468
Pvu8g1705 274 Gene3D Transferase(Phosphotransferase) domain 1 35 256 - -
Pvu8g1705 274 ProSiteProfiles Protein kinase domain profile. 1 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1705 274 ProSitePatterns Serine/Threonine protein kinases active-site signature. 83 95 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1705 Pvu-Chr8 42522970 42525943 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1705 1 244 Receptor kinase-like Gene Family AT4G29180 50.407 2.35e-82 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu8g1705 PK_Tyr_Ser-Thr 4.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1705 - - pvu:PHAVU_008G164500g 558.91