LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu8g1703	ATGGACAGAGAATTGCAATGGACCCTAGTTTTAGCAATTTGTGCTTCATCATTCTTTAATATACTTGCTCAGAACACTCAACTCACTTACAGGAACCTTGCCATTGATTATTCAGGTGTTATAAGCATTGACTGTGGGGTAAACGAGGGCTACACTGACAAAACAACCAACTTACAGTATCAAGCAGATGATATCCAATTTGGTGAAATCTATAATACATTCTCAATTTGCAACATGAATGTAAGTCAAATACATAAGCAGTTGAACACTCTGAGAAGTTTCCCCTATGGGAAGAGAAATTGCTATACCTTGACACCCAAACAGGGAAAGAATAAGAAATACATAATCAGGGCTCACTTTGCATATGGCAACTACGACAACAAAAATGAAGCACCAGTTTTTGATTTGCATCTTGGAGTCAATTTCTTCAAGACAATAAACTCTACTGAGGCTGAGGTAATTCGAATCGAAGCTGTTCATTTTGCCTCAACAGAAACAATCGATTTATGCCTCGTGAACACCGATCAAGGGGTGCCCTTCATTTCATTGTTGGAGCTATGGCCATTGGACAATTCCATTTATCAAAGTTCTTCCACTTTGTTGACACTAGATCTCCTCACACGACTTAACCTTGGTGCCTCTGAAGATAACTTTATCAGGTACATAGATGATATATATGGAAGGTCATGGGAAGTTCCAAACAATTATACCAAGAATTCATTGAAAACCTCATCAGCTATTGATTTGGATAAACTTGTTGATCCTTACAAACTGCCAGCAGAAGTTTTGAGTTCTGCAGTGGAGGCAAAGTCCTTGGAATTCACACTCAATTATGCCATGGATTCTGAATATTACGTTTATCTTCATTTTTTTGACTTCAAGGATCGGACAAATAAACAAAAACGAAGATTGAATATTGTTATTAATGATTTTGATGATAATAATGTGAAACAAATTCTTACTCTTTCATACTGGAAGCCCCATAGCATTATTTTGCCTATAAAACACGGGATGGGTCTTCGGAAGATATTGATTGAAGCCGACACTGATTATGAGTTACCTGCAATGCTTAATGCTCTTGAGATTTACAGAGTAGTACCACAGTCAGATTCTTCCACACAACAAGAAGATGTTGATGCTATCTGGCACATCAAAGATGTTTATATGATCAATAAAATGAATTGGCAAGGAGACCCCTGTGGACCAAAGAATTTTACATGGGAAGGTGTGAAATGCAGCAATGGGAACACTCCAAGAATCATTTCATTAAACTTGAGCTCAAGCAAGTTGTCAGGAGAAATAGATTCCTCCTTCTCCAACCTCACATGTTTGGAGACTTTGGATTTGTCAAACAATGAATTGACAGGGGAGGTGCCAGAATCTTTTGGAAAACTGCCACAATTGCAGTTCCTTAACTTGTCAAGGAATATGCTCACAGGTTCAGTTCCTGAGAGTCTAAAGGCAAAGTCCTCTAACAACTCTTTGCAATTGAGTTTGGATGGAAATCTCTGTCTCTATCAGACAGGGTCATGCAAGAGAAGCCACAAGTTTATCATTCCATTAGTTGCATCTATGACAGCATTTGTTGTTTTGGTCCTCACAATATCTACCGTAGTTATGGTGATCTGGAGACTTAGAAAAAAGGGAAAAGTGATTTCTTCAATTTCTGCCAAAGATGAGCTACTGAAATCAACAAATCAAGTATTTTCTTACTCAGAGATTGTTAGAATCACTAATAATTTCACAACAATTATTGGGAAAGGTGGATTTGGTAAGGTTTACCTAGGTACTTTAGAGTGTGAGAAAAGAGTTGCTGTGAAGATACTTTCTTCACCATCAGCACAAGGGTATAAGGAATTTCAATCAGAGGCAAAACTATTGATGCATGTTCATCACAGAAACGTGGTTTCTCTTGTGGGATACTGTGATGAAGGTGACACTAGAGCACTTATCTATGAATATCTACCAGAAGGGAACCTCCTACAAAAATTATCAGATAAGAACCCAAGTTTTTTGGAATGGACGCAAAGACTTAAAATTGCTATGGATGCAGCAAATGGGTTGGACTATTTGCATAATGGATGTAAGCCACCAGTAATTCACAGAGATTTAAAAACATCCAACATCTTACTAGACGAAAATATGCGTGCCAAGATTTCTGATTTTGGAGTGTCTAAAACTTTTGCCAATGACAGTGACACTTATGTCACTACTTACCCAGCAGGCACACCAGGTTACCTTGATCCTGAATTTTATTGCTCAGGGACTCTGAACAAAAAGAGTGATGTTTATAGTTTCGGGATAATCCTACTAGAATTAATCACTGGTCAACCAGCACTAAGAGGAACTCCAGAAAATCTGAGTTACATACTTCCTTGGGTTAACAATAAACTGAGAACAGGAAATATCCATGAAATAGTTGATCCAAGGTTACATGGAAAGTACAATGGTGCTTCAGCATGGAAATTTATAGGGATAGCCATGTCATGTCTCCCTCAAGTTCCAATTCACAGGCCTGACATAGGGCACATAGCCCTAGAATTAAGGGAGTGTTTGTCTCTTGAATTGTCTCTTGAAAGGACTGTGAGCGACGTCAGAGATACATTAGTCATGAGTTCTAGGCAAATTGAGTTCCATTAG	2640	0.3826	MDRELQWTLVLAICASSFFNILAQNTQLTYRNLAIDYSGVISIDCGVNEGYTDKTTNLQYQADDIQFGEIYNTFSICNMNVSQIHKQLNTLRSFPYGKRNCYTLTPKQGKNKKYIIRAHFAYGNYDNKNEAPVFDLHLGVNFFKTINSTEAEVIRIEAVHFASTETIDLCLVNTDQGVPFISLLELWPLDNSIYQSSSTLLTLDLLTRLNLGASEDNFIRYIDDIYGRSWEVPNNYTKNSLKTSSAIDLDKLVDPYKLPAEVLSSAVEAKSLEFTLNYAMDSEYYVYLHFFDFKDRTNKQKRRLNIVINDFDDNNVKQILTLSYWKPHSIILPIKHGMGLRKILIEADTDYELPAMLNALEIYRVVPQSDSSTQQEDVDAIWHIKDVYMINKMNWQGDPCGPKNFTWEGVKCSNGNTPRIISLNLSSSKLSGEIDSSFSNLTCLETLDLSNNELTGEVPESFGKLPQLQFLNLSRNMLTGSVPESLKAKSSNNSLQLSLDGNLCLYQTGSCKRSHKFIIPLVASMTAFVVLVLTISTVVMVIWRLRKKGKVISSISAKDELLKSTNQVFSYSEIVRITNNFTTIIGKGGFGKVYLGTLECEKRVAVKILSSPSAQGYKEFQSEAKLLMHVHHRNVVSLVGYCDEGDTRALIYEYLPEGNLLQKLSDKNPSFLEWTQRLKIAMDAANGLDYLHNGCKPPVIHRDLKTSNILLDENMRAKISDFGVSKTFANDSDTYVTTYPAGTPGYLDPEFYCSGTLNKKSDVYSFGIILLELITGQPALRGTPENLSYILPWVNNKLRTGNIHEIVDPRLHGKYNGASAWKFIGIAMSCLPQVPIHRPDIGHIALELRECLSLELSLERTVSDVRDTLVMSSRQIEFH*	880

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu8g1703	879	PRINTS	Leucine-rich repeat signature	444	457	-	-
	Pvu8g1703	879	PRINTS	Leucine-rich repeat signature	465	478	-	-
	Pvu8g1703	879	SMART	serkin_6	579	852	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu8g1703	879	SUPERFAMILY	Protein kinase-like (PK-like)	564	845	IPR011009	-
	Pvu8g1703	879	Pfam	Protein tyrosine and serine/threonine kinase	582	783	IPR001245	GO:0004672\|GO:0006468
	Pvu8g1703	879	Gene3D	Ribonuclease Inhibitor	383	499	IPR032675	-
	Pvu8g1703	879	ProSiteProfiles	Protein kinase domain profile.	579	852	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu8g1703	879	PANTHER	OS07G0107800 PROTEIN-RELATED	34	865	-	-
	Pvu8g1703	879	SUPERFAMILY	L domain-like	404	491	-	-
	Pvu8g1703	879	Gene3D	Phosphorylase Kinase; domain 1	561	654	-	-
	Pvu8g1703	879	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	699	711	IPR008271	GO:0004672\|GO:0006468
	Pvu8g1703	879	SMART	LRR_typ_2	441	464	IPR003591	-
	Pvu8g1703	879	SMART	LRR_typ_2	465	488	IPR003591	-
	Pvu8g1703	879	Gene3D	Transferase(Phosphotransferase) domain 1	655	868	-	-
	Pvu8g1703	879	PANTHER	RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED	34	865	-	-
	Pvu8g1703	879	ProSitePatterns	Protein kinases ATP-binding region signature.	585	607	IPR017441	GO:0005524
	Pvu8g1703	879	CDD	STKc_IRAK	585	848	-	-
	Pvu8g1703	879	Pfam	Leucine rich repeat	422	478	IPR001611	GO:0005515
	Pvu8g1703	879	Pfam	Malectin-like domain	43	365	IPR024788	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu8g1703	Pvu-Chr8	42492472	42502492	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu8g1703	8	853	Receptor kinase-like Gene Family	AT2G19210	39.679	0.0	608

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Pvu8g1703		Malectin_like	1.8e-76	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu8g1703	-		-	vun:114194066	992.645