Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1700 ATGGAAAATGAAAATGCTTCTAGTGGATTTGGTAAAGGGTTCAACAAGGCTAAGCCTTACCTGGCTATGGTGTCCCTTCAGTTTGGTTACTCAGGAATGTACATCATCACCATGGTTTCTTTCAAGCATGGCATGAGCCATTGGGTACTCTCAGTGTACCGTCATATAGTTGCCACTCTCATCATGGCCCCTTTTGCATTTTTTCTTGAAAGAAAAATACGACCAAAGATGACTCTCCCTGTGTTCCTGAGGCTAGCAGCACTTGGTTTCCTTGAGCCAGTGCTTGACCAAAACTTGTACAACATGGGGATGAAGAACACCTCAACAACGTTTGCATCGGCCACAGTTAATGTTCTCCCAGCCATTACTTTTATAATGGCACTTATATTCAGGTTAGAGACAGTGAATTTGAGAAAAATACACAGCGTGGCCAAGGTAATTGGAACCGCAGTAACAGTCACAGGAGCCATGGTTATGACCTTGTACAAAGGCTCTGCCCTTCAGTTCGTCAAGGGTCAAGCAAACCACCAGGAAAGTGGCAGCACCACACAACCATCTGAACAAAACTGGGTGCTTGGCACAGTAATGCTCCTAGCAAGTTGTGGTGGTTGGGCCAGTTTCTTTATCTTGCAGTCCTTCACATTGAAGATGTACCCGGCAGAGCTCTCAGTCACAGCTTGGATTTGCTTTTTGGGCATTTTTGAGGGTTCAATTGCAAGCTTTATATTTGAACGTGACATGAGTGTGTGGTCCATAGGCATCGACTCAAGGCTCCTTGCTTGTGTTTATTCTGGTGTGGTGTGTTCTGGAATGGCATACTATGTACAAGGAGTTGTGACCAGGGAACGTGGACCTGTGTTTGTGACTTCTTTCAGTCCACTATGTATGATTATCACTGCTGCATTGGGATCCATTGTCTTGGCTGAGCAAGTTTACATGGGAAGTGTAATTGGAGCAATTATCATTGTGAGTGGACTTTACACAGTGGTATGGGGAAAAAGCAAAGACAATGTGAACAAAACCGAGGCAGAGAAAAGTGAAGGCCAAGAATTGCCAATTAAGGACAGTGCAGCATCAGGATCAGGCATTTTTGACAGCATTGAGATCAATGTTCCTTCTGGAGCAGGAAAGAATGTTCTTGCATCACCAAGAACATAA 1158 0.4439 MENENASSGFGKGFNKAKPYLAMVSLQFGYSGMYIITMVSFKHGMSHWVLSVYRHIVATLIMAPFAFFLERKIRPKMTLPVFLRLAALGFLEPVLDQNLYNMGMKNTSTTFASATVNVLPAITFIMALIFRLETVNLRKIHSVAKVIGTAVTVTGAMVMTLYKGSALQFVKGQANHQESGSTTQPSEQNWVLGTVMLLASCGGWASFFILQSFTLKMYPAELSVTAWICFLGIFEGSIASFIFERDMSVWSIGIDSRLLACVYSGVVCSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSIVLAEQVYMGSVIGAIIIVSGLYTVVWGKSKDNVNKTEAEKSEGQELPIKDSAASGSGIFDSIEINVPSGAGKNVLASPRT* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1700 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
Pvu8g1700 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 334 - -
Pvu8g1700 385 PANTHER WAT1-RELATED PROTEIN 13 360 IPR030184 GO:0016021|GO:0022857
Pvu8g1700 385 Pfam EamA-like transporter family 31 150 IPR000620 GO:0016020|GO:0016021
Pvu8g1700 385 Pfam EamA-like transporter family 193 330 IPR000620 GO:0016020|GO:0016021
Pvu8g1700 385 PANTHER WAT1-RELATED PROTEIN 13 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1700 Pvu-Chr8 42158005 42162371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1700 11 370 Nodulin-like Gene Family AT4G08300 62.810 4.98e-167 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1700 - - gmx:100814921 654.825