Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1696 ATGAAGGATCCAAACACGCCGAACCGCATGCAAAAAGTGGACACAGATTCTCCTGCATGCGGAAGCTCCAAGATGAACACTCCAGCAAAACTCACTCCAAGAAAACGAATTTCCAAGAATAACACGCCTAAGAAGAATAGCACGCCTAGGAAGACTAGCACGCCGAATAAGACGCCTAAGAAAACTGGATCAGTTGTTGCTTCACCAGGATCTGCTCAAAAGATCGATCTGAGGTTGGAGGCAAAGTTGTCGGCGGAGGTTTATGCAAAGGTGTATGCAGGGCTGAAAATACATCCCTTCTTTTCCCTATGGAAGGAGGAAAATGAACGCCAGCGAGCTTTACTTGCTGCTAGGAAAAAAGGAAAAGGAATTGGTGCTTCTAGTCATGTATTTGAAAATGTTCAGGATGATGCCTCACCCATTGACTGGAGTGACTGGACATTTTTGGATAATACCACAGTTGCATATTCTGGAGAGAATTCAAATTTACCTTTTATGGAAGGTTCCGTTGAATCCTTAAATCTTGATAACATACCTAGTGCTTCAAGACTCTCAAGTGCTTCAATCATTAAGAATGTCATGTCTTGTCCAAGTCAACTTTCTATACAGCCAGATAGTATGCTGAAAATATCACCACCAAATTCAGTTGTGTTAGAGAAAGCAGAATGTCATTTGAAGTCAAAAGATGTCAAAGTGGATCTGGGCTTGGAGGTGAATGAAAATACCTTTTCAGGACACATGGGCCTTTTCAAAAGGCCGGATAGTGAGCCACAGTGTAAATTTCTTCAAGCAAGCATGAGGTCTTACTACCATGGTTCTGAAGGTAACAACAGCAGCTTATGGATGCATAAGTACAAGCCAACAAAAGCCTTTGAGGTGTGTGGTAATGAAGAGGCTATAAATTTCTTGAGTGACTGGTTAGATCTTTGGCATAAAAGACTTTATCAGAGCAGAAAAAGTTCCTCTAACAAGGGTCAAAGTAAAAGGCAAGATGATGGTGCTGACTCAGAAGATATTCATGAGAGTCCCCTACAGAGTGTTCTCTTGGTTACAGGACCAATTGGGAGTGGCAAGTCTGCAGCTGTCTATGCTTGTGCCCAAGAGCAAGGGTTTAATGTCTTAGAGATCAATGCATCAAGTTGTCGAAATGGGGCTGCTATCACTGCTATCAAGAATAAATTAGAAGAACCTAGTGCGGGCAAAATCACAAGTTGTTTCAAACCTGTGAAGTCGCTTCCTGCTGCCAAGAAGATGGATGATTGGGCGATTGCTTCCAGTTCTATTGATGAACCCCGCCAAACTTTAATTCTAGTTGAGGATGTGGGCATCATTTTTCCTGAAGATCGTGGATTTATCACTGCCATACAACACTTTTCTGCTACAGCAAAATGGCCTATTATATTGACCAGCGATAGAAATAATGGTGGCCTACCAAACAATTTTGCAAGACTACATGTTTCTTTCTCATTTCCATTGCGAGAAGAGTTACTGTGCCATATGTACAAGGTTTGCATCACAGAAGAAGTCAATACCAATCCTCTTCTACTGAAAAAATTTATCCAGTCTTGCGATGGAGATATTCGGAAAACCATTATGCAACTTCAGTTCTGGTTCCAGAGTAAAAAACATAGCAAAGACAGGAAAGTGCCAAAGGTGTATGGTTTGCTTCCTTTTGATCTTGAGGCTTGTCACAAGATTATACCGAAGATACTGCCCTGGAGTTATCCCTCAGAGTTGTCCCAACTAATTGAGAAGGAAGTTGCTAAGTCAATAGCCACAATGGATGAAAACTCGTGCTTGCAGGGGTCAGTTAACCAAGAGCTAGACATAAATGAAAGGAAAAAGGATTTAGATGTGAAGTGTATGAATACTGATTATTTAGAGGCCAAGGTAAAGAGAATCAAGAGATCTCTTACATACCACAATGGGGTTGAAAGTCAACATAGTGCTATTTCTGAATTTTCAAATTGTTCTGGATCCCCGGTAACATCCTCTTGGCAAGAGGGTCAAAGTAAACTTGGTTCTGAGAAGGATCCACATAATGCACATTCTTTAGACGTTCATGAGGAAGTTTACAAGACACATTCCCTGGAAAGCAACAGTGAATATCTCTCTAAGTTTCAAATGAATCAAAACTATCCAAGTACATCATTTTATGCATCCTGTTCCATTCCTGAGACAACAATTCAAAAGGGAATAAAGCCATTGTCTGGATCAGTGTCTTGCTGTCATGCTGGTCCAGTAGAAGTATCTCTTAATAATGAGCAGACACCGATCACTTTGAGTGTTTGTCAGTCCTTAGACAAATTGCCACAAAATTCTGATCCATTTGCAAATACTGAAATTCCAGAATCTTCTTCGACAAAAGCAGCTGTGCAAAATTTCAGAGATGGGAACACGAAAACCACAACTGTGAGTAATGTGATAGATGAGCGCAGTCATGCTGATTTTATATCAAACTCAAAGTTTCTTGACTCCAGAACACCGATCACTTTGAGTGTTTGTCAGTCCTTAGACAAATTGCCACAAAATTCTGATCCATTTGCAAATACTGAAATTCCAGAATCTTCTTCGACAAAAGCAGCTGTGCAAAATTTCAGAGATGGGAACACGAAAACCACAACTGTGAGTAATGTGATAGATGAGCGCAGTCATGCTGATTTTATATCAAACTCAAAGTTTCTTGACTCCAGTCCATCTGTGCCGATGGATATGATAGAAAAGTTGTGGAGGGAACTTCGTATATGTCAAAAGGACTTAGGACAGCATGCCAACTCAGAACAGCTGAATGTTAGCCAAGTTCTTAGACTTACAAGTGGGCTGACCGATCTAATTTCTGAAGCTGACTTATTGTTTCATAATCACCAACAAAAACAATGTGGTCTTATGGAGCCTCCAGTGACCCTTTTTGATGAAGCCACAAAGAGTTGGTATGATGAGCAAGTGATGATGTCTACTGTTGCTGCACATGGTTTTTCTTTTTATGCCAAACATATATCAGATGTAGGATCCGAGTTTGGTTGTAAGAACGAGGTAGATCTAATCTCGGAGATGTTGGCTAGCACTACTAATGTTATGGCACTGGGAAAATTATCTAGACAGGACCAAACAAAAAGCACTAGTATCTATGACAATAAGCTATTAGAGATGAATGACCCGACAATTGATACGAATAGAACATCTTTTTCCAAAGTGATCCGGTCTATCATTCCAGCAAGATCATTATTGTCAATGAAAGGTCTTGCATTCAGTGAATACATGTCTTCACTACGCCAAATCTCAATTTCTGAAGGTTTCCGCATTTCACATGGTTCAGAAAATGTGAAAAAACGAAGGCGGGTTGGTCCACATTATTTGAGCAAAGGTAGAATGAAGTTGACTCCTGAAGATATATCAGTGGTGTGCAAAGGTGGTTTGTACAGAAAGATTTATTCGCAATACATTGCTAACATGGAAAGGAAACCTGCATGA 3471 0.4036 MKDPNTPNRMQKVDTDSPACGSSKMNTPAKLTPRKRISKNNTPKKNSTPRKTSTPNKTPKKTGSVVASPGSAQKIDLRLEAKLSAEVYAKVYAGLKIHPFFSLWKEENERQRALLAARKKGKGIGASSHVFENVQDDASPIDWSDWTFLDNTTVAYSGENSNLPFMEGSVESLNLDNIPSASRLSSASIIKNVMSCPSQLSIQPDSMLKISPPNSVVLEKAECHLKSKDVKVDLGLEVNENTFSGHMGLFKRPDSEPQCKFLQASMRSYYHGSEGNNSSLWMHKYKPTKAFEVCGNEEAINFLSDWLDLWHKRLYQSRKSSSNKGQSKRQDDGADSEDIHESPLQSVLLVTGPIGSGKSAAVYACAQEQGFNVLEINASSCRNGAAITAIKNKLEEPSAGKITSCFKPVKSLPAAKKMDDWAIASSSIDEPRQTLILVEDVGIIFPEDRGFITAIQHFSATAKWPIILTSDRNNGGLPNNFARLHVSFSFPLREELLCHMYKVCITEEVNTNPLLLKKFIQSCDGDIRKTIMQLQFWFQSKKHSKDRKVPKVYGLLPFDLEACHKIIPKILPWSYPSELSQLIEKEVAKSIATMDENSCLQGSVNQELDINERKKDLDVKCMNTDYLEAKVKRIKRSLTYHNGVESQHSAISEFSNCSGSPVTSSWQEGQSKLGSEKDPHNAHSLDVHEEVYKTHSLESNSEYLSKFQMNQNYPSTSFYASCSIPETTIQKGIKPLSGSVSCCHAGPVEVSLNNEQTPITLSVCQSLDKLPQNSDPFANTEIPESSSTKAAVQNFRDGNTKTTTVSNVIDERSHADFISNSKFLDSRTPITLSVCQSLDKLPQNSDPFANTEIPESSSTKAAVQNFRDGNTKTTTVSNVIDERSHADFISNSKFLDSSPSVPMDMIEKLWRELRICQKDLGQHANSEQLNVSQVLRLTSGLTDLISEADLLFHNHQQKQCGLMEPPVTLFDEATKSWYDEQVMMSTVAAHGFSFYAKHISDVGSEFGCKNEVDLISEMLASTTNVMALGKLSRQDQTKSTSIYDNKLLEMNDPTIDTNRTSFSKVIRSIIPARSLLSMKGLAFSEYMSSLRQISISEGFRISHGSENVKKRRRVGPHYLSKGRMKLTPEDISVVCKGGLYRKIYSQYIANMERKPA* 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1696 1156 MobiDBLite consensus disorder prediction 662 681 - -
Pvu8g1696 1156 MobiDBLite consensus disorder prediction 324 338 - -
Pvu8g1696 1156 Pfam ATPase family associated with various cellular activities (AAA) 348 409 IPR003959 GO:0005524|GO:0016887
Pvu8g1696 1156 MobiDBLite consensus disorder prediction 10 69 - -
Pvu8g1696 1156 Gene3D - 491 552 - -
Pvu8g1696 1156 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 432 719 IPR004582 GO:0006281
Pvu8g1696 1156 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 828 1152 IPR004582 GO:0006281
Pvu8g1696 1156 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 25 389 IPR004582 GO:0006281
Pvu8g1696 1156 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 719 826 IPR004582 GO:0006281
Pvu8g1696 1156 MobiDBLite consensus disorder prediction 1 70 - -
Pvu8g1696 1156 MobiDBLite consensus disorder prediction 319 338 - -
Pvu8g1696 1156 Gene3D - 278 490 IPR027417 -
Pvu8g1696 1156 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 25 389 - -
Pvu8g1696 1156 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 432 719 - -
Pvu8g1696 1156 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 719 826 - -
Pvu8g1696 1156 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 828 1152 - -
Pvu8g1696 1156 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 279 542 IPR027417 -
Pvu8g1696 1156 CDD AAA 348 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1696 Pvu-Chr8 42046629 42061315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1696 281 536 Core DNA Replication Machinery Family AT5G22010 22.692 4.36e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1696 - - pvu:PHAVU_008G163600g 1827.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1696 8 42046629 42061315 Pvu8g1696 8 42046629 42061315 ECH