Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1679 ATGAAAGGGTTGAAGCAGAAGAAAGCCCACGTCATGGAAATTCAGGTCAATGGTGGTTCTATTGCACAGAAGGTGGACTTTGCGTACAGTTTCTTTGAGAAACAGGTCCCTATTGATGTTGTGTTCCAGAAAGATGAGATGATTGACGTCATCGGAGTGACAAAGGGTAAGGGTTATGAGGGTGTTGTAACTCGTTGGGGTGTTACACGTCTTCCTCGTAAGACTCACAAGGGTTTGAGGAAGGTGGCTTGTATTGGTGCTTGGCACCCTGCCAGAGTTTCATTCACTGTTGCCAGGGCTGGTCAGAATGGATACCATCACAGAACTGAGTTGAACAAAAAGGTTTACAAGCTCGACAAAGCTGGGGATGAGTCTCACTCTGCTCTTACTGAGTTTGATAGGTACTACAAATATGTGGAGTGGAGGTGA 429 0.4592 MKGLKQKKAHVMEIQVNGGSIAQKVDFAYSFFEKQVPIDVVFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLPRKTHKGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLDKAGDESHSALTEFDRYYKYVEWR* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1679 142 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 1 137 IPR045077 GO:0003735|GO:0005840|GO:0006412
Pvu8g1679 142 Gene3D - 4 37 - -
Pvu8g1679 142 SUPERFAMILY Translation proteins 4 120 IPR009000 -
Pvu8g1679 142 Pfam Ribosomal protein L3 1 137 IPR000597 GO:0003735|GO:0005840|GO:0006412
Pvu8g1679 142 ProSitePatterns Ribosomal protein L3 signature. 42 65 IPR019926 -
Pvu8g1679 142 PANTHER 60S RIBOSOMAL PROTEIN L3-LIKE 1 137 - -
Pvu8g1679 142 Gene3D Ribosomal protein L3, domain 3 56 104 IPR044892 -
Pvu8g1679 142 Gene3D Translation factors 38 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1679 Pvu-Chr8 41554128 41555812 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1679 1 139 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 84.892 3.44e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1679 K02925 - pvu:PHAVU_008G162000g 295.819