Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1666 ATGGCAGAGATGCTGCGCCTGTTGCTCATGATTGGAGCGATGTTGTTTGGAGTAAGAGCTGAGCCAATGGAAGATAAACAAGCATTGCTTGATTTCCTTCACAACATTAGCCACTCTCATCATCTGATCAACTGGAACAAGAGCTCTTCTGTGTGCAAAAGTTGGATAGGAGTGACCTGCAACTCTGAGCAATCACAGGTTATTGCCCTCCAACTGACCAGAACTGGATTGAGTGGTCCAATCCCACCCAACACTCTTAGCCGTCTCTCAGCACTCCAAACTGTGAGTCTTGCATCAAATACCATAACTGGTTCTTTCCCTTCTGATTTCTCTAAGCTAAATAATTTGATCTATCTGTATCTCCAATTCAACAAATTTTCTGGTCCATTGCCATCAGACTTTTCAGTATGGAAGAATCTTAGTATTGTCAATTTATCCAACAATTCCTTCAATGGGAGCATCCCATTTTCACTTTCAAATTTGACTCATCTCTCTTCTTTAGTACTAGCCAACAACTCCCTTTCAGGTGACATTCCTGATCTCGATATCCCTACCCTGCTAGAGCTGAATTTTGCCAACAATAACCTCAGTGGGGTTGTTCCTGAATCCTTTAAGAGATTTCCAAGGGGGGCATTTTCTGGTAACAATCTTGCTTCTTCAGATGCTCTTTCTCCTTCTTTTCTTGTTCAACCCCCAAATCCTCATCCAACAACGAAAAAATCCAAAGGACTTAGGGAACCAGCCTTGTTGGGTATCATTATTGGAGCTTGTATGCTGGGAATTGCAGTTATAACAGTTTTTGTGATTGTGTGCTGCTATGAGAAAGGTGGTACAAGTGGACAAAAAGTGAAGTCTCAGAACGGAGAGGTATCCAGGAAAAAGGAAGGTTCTGAAAGTCGAGACAAGAACAGAATTGTTTTCTTTGAGGGTTGCAATCTTGCATTTGACTTGGAGGACTTGTTGAGAGCATCTGCCGAGGTCCTTGGAAAGGGCACGTTTGGGACAGTGTACAAGGCTGCTCTAGAAGACGCAACAACCGTGGCAGTGAAAAGGTTGAAGGATGTCATGGTCGGAAAACGCGAGTTTGAACAACAGATGGAGATGGTGGGGAGGATTAGGCACGATAATGTGGCTGCTTTAAGGGCATATTACTATTCAAAGGAGGAGAAACTTATGGTATATGATTACTACGAACAGGGCAGTGTGTCTTCAATGTTGCATGGAAAAAGAGAAGCAAGAAGAATTTCTTTAGACTGGGATAGCCGTTTGAAAATAGCAATTGGTGTAGCAAGAGGCATTGCTTACATCCACGCTCAACAAGGAGAGAAACTTCTCCATGGAAACATAAAGTCCTCTAACATCTTCCTCAACCCCCGAGGATATGGTTGTCTATCTGACATTGGTCTTGCAACACTGATGAATCCAGCAATGAGGACAACAGGATACCGTGCGCCTGAAGCAACGGACACCAGAAAATCAGTTCCGGCATCTGACGTCTACAGTTTTGGTGTGCTGCTGCTTGAGCTTCTAACTGGGAGGTTTCCCTTACATGCCAAAGGAGGTGAGGAAGTTGTCCACTTGGTTAGATGGGTGAATTCTGTGGTTAGAGAGGAGTGGACTGCAGAAGTGTTTGATGTGGAGTTGCTGAGGTATCCAAATATTGAGGAGGAAATGGTTGAGATGCTGCAAATAGGGATGGCATGTGTTGTGAGAACACCAGATCAGAGGCCCAAAATTGGTGAGGTGGTGAGAATGGTGGAGGAAATTCGTAAAGTAAATACTGAAAATAGATCATCCACTGAATCTAGATCAGAAGGTTCCACTCCAACCCCTCATTCAATTGAGACACCTTCTACCTCTTTTGCATATTGA 1872 0.4364 MAEMLRLLLMIGAMLFGVRAEPMEDKQALLDFLHNISHSHHLINWNKSSSVCKSWIGVTCNSEQSQVIALQLTRTGLSGPIPPNTLSRLSALQTVSLASNTITGSFPSDFSKLNNLIYLYLQFNKFSGPLPSDFSVWKNLSIVNLSNNSFNGSIPFSLSNLTHLSSLVLANNSLSGDIPDLDIPTLLELNFANNNLSGVVPESFKRFPRGAFSGNNLASSDALSPSFLVQPPNPHPTTKKSKGLREPALLGIIIGACMLGIAVITVFVIVCCYEKGGTSGQKVKSQNGEVSRKKEGSESRDKNRIVFFEGCNLAFDLEDLLRASAEVLGKGTFGTVYKAALEDATTVAVKRLKDVMVGKREFEQQMEMVGRIRHDNVAALRAYYYSKEEKLMVYDYYEQGSVSSMLHGKREARRISLDWDSRLKIAIGVARGIAYIHAQQGEKLLHGNIKSSNIFLNPRGYGCLSDIGLATLMNPAMRTTGYRAPEATDTRKSVPASDVYSFGVLLLELLTGRFPLHAKGGEEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIGMACVVRTPDQRPKIGEVVRMVEEIRKVNTENRSSTESRSEGSTPTPHSIETPSTSFAY* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1666 623 CDD STKc_IRAK 328 589 - -
Pvu8g1666 623 PANTHER LRR RECEPTOR-LIKE KINASE 6 616 - -
Pvu8g1666 623 Pfam Protein kinase domain 325 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1666 623 Gene3D Phosphorylase Kinase; domain 1 287 396 - -
Pvu8g1666 623 Pfam Leucine rich repeat 81 126 IPR001611 GO:0005515
Pvu8g1666 623 ProSitePatterns Protein kinases ATP-binding region signature. 328 359 IPR017441 GO:0005524
Pvu8g1666 623 PANTHER OS05G0588300 PROTEIN 6 616 - -
Pvu8g1666 623 SUPERFAMILY Protein kinase-like (PK-like) 326 597 IPR011009 -
Pvu8g1666 623 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Pvu8g1666 623 Gene3D Ribonuclease Inhibitor 22 233 IPR032675 -
Pvu8g1666 623 Gene3D Transferase(Phosphotransferase) domain 1 397 610 - -
Pvu8g1666 623 ProSiteProfiles Protein kinase domain profile. 322 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1666 623 MobiDBLite consensus disorder prediction 599 623 - -
Pvu8g1666 623 MobiDBLite consensus disorder prediction 593 623 - -
Pvu8g1666 623 SUPERFAMILY L domain-like 29 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1666 Pvu-Chr8 41244478 41247983 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1666 14 614 Receptor kinase-like Gene Family AT4G23740 55.008 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu8g1666 Pkinase 6.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1666 - - gmx:100810095 1041.18