Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1662 ATGCAAGGTAGTGGGTCTTTCCTTAGCTTTCAACAAAGTTGGTTGTTTTCCCAAGAGAGTAATTTGCATGAAGGTTGTGACCAATGGAACCATGTTAGTCCCAAAAGCACCACACACATGCGCCTGGTCCAAAATTTCAGTTGCTCTGAAATTGCTACTTGCTATAGCTCCATGTTCAAAGGTGCAAAAGAGAAGCAACAACATGGTGAAAGTTCATCTTCTGGGTGGCTATACTCAGAACCACATGCCCATAGTGATAGCCTGAATGAGTCAGCAGCACAAGATTTAGTCTTGAGAAAGCGATCTTTTATGGGAGAGACCATGCAAGCTGCCAATGTCAAGAAGCCATGCACAACTACAAGTAAAGCAACAAAACCAAAGTCAAGCCCACCCAAGGATCCTCAAAATGTTGCTGCCAAGAACAGAAGAGAGAGAATAAGTGAGCGGCTTAAGACACTCCAAGAACTGGTCCCTAACGGCTCCAAGGTCCACTGGCCTTTGAAAACGAGGAATACAATGGGAGCTTACCTAATTTGA 537 0.4432 MQGSGSFLSFQQSWLFSQESNLHEGCDQWNHVSPKSTTHMRLVQNFSCSEIATCYSSMFKGAKEKQQHGESSSSGWLYSEPHAHSDSLNESAAQDLVLRKRSFMGETMQAANVKKPCTTTSKATKPKSSPPKDPQNVAAKNRRERISERLKTLQELVPNGSKVHWPLKTRNTMGAYLI* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1662 178 MobiDBLite consensus disorder prediction 108 146 - -
Pvu8g1662 178 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 128 162 IPR036638 GO:0046983
Pvu8g1662 178 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 4 164 - -
Pvu8g1662 178 Coils Coil 136 156 - -
Pvu8g1662 178 Gene3D - 120 171 IPR036638 GO:0046983
Pvu8g1662 178 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 4 164 - -
Pvu8g1662 178 MobiDBLite consensus disorder prediction 65 91 - -
Pvu8g1662 178 MobiDBLite consensus disorder prediction 68 91 - -
Pvu8g1662 178 MobiDBLite consensus disorder prediction 112 135 - -
Pvu8g1662 178 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 130 178 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1662 Pvu-Chr8 41164005 41165706 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1662 19 163 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 41.830 1.09e-21 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1662 - - pvu:PHAVU_008G160400g 331.643