Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1659 ATGGTGTTTGCAATGAGGGTAAATTCTGATTATGTTCATGAAAGGGTGCTTAGAACAAGTGACGACTTTGTCTGGCCTGTTGATACTGCATTCCTAGGACGCTTTGTTGTTGATGTTGAATTTCTTGACCTGAAGGCCTGCCCTGGCAATGGTGGAGTAACCAGATCTATATGGCCATCTGATGGAAAACTGCAAACTGTTGCAGCTCAAAGCACTCTTCGATGCCTGTCTCGCATGCTTGACGAGTCTATACATGCTGACCTCACCATCATCACTGCAGATGGTACTCTGAAGGCTCACAAGGCAGTTTTATCTGCTAGTTCTACAGTGTTCCATGGCTTGTATCTTCAGAATGGTGATGAAGAAGATACATCTACGATCCACATGGAAGATATGTCTGAAGAATCCTGCAAGTCCCTTCTAAGTTACCTGTACGGTACTATTAAACAAGAAGATTTCTGGAACCACAGGCTTCCATTGCTTGCAGCAGCCAATAAATATGAGATTGGTGATCTCAAAGATGCCTGTGAGGAAAGCCTACTAGAAGATCTTAACTCAGGAAATGTTCTGGAGAGGCTAAAGGACGCTTGGCTTTACCAGTTACAAAACTTAAAGAAAGGGTGCTTCACATTCTTATTTGATTTTGGTAAGATATATGATGTTAGAGATGAAATAAATACCTTTTTCCAACATGCTGACAGGGAGCTAATGCAGGAGATGTTTCTGGAAGTGCTTACAATTTTGAAATAG 750 0.4173 MVFAMRVNSDYVHERVLRTSDDFVWPVDTAFLGRFVVDVEFLDLKACPGNGGVTRSIWPSDGKLQTVAAQSTLRCLSRMLDESIHADLTIITADGTLKAHKAVLSASSTVFHGLYLQNGDEEDTSTIHMEDMSEESCKSLLSYLYGTIKQEDFWNHRLPLLAAANKYEIGDLKDACEESLLEDLNSGNVLERLKDAWLYQLQNLKKGCFTFLFDFGKIYDVRDEINTFFQHADRELMQEMFLEVLTILK* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1659 249 PANTHER OS08G0495500 PROTEIN-RELATED 10 249 IPR044714 -
Pvu8g1659 249 SMART BTB_4 86 184 IPR000210 GO:0005515
Pvu8g1659 249 CDD BTB_POZ_ZBTB_KLHL-like 85 167 - -
Pvu8g1659 249 Pfam BTB/POZ domain 78 182 IPR000210 GO:0005515
Pvu8g1659 249 ProSiteProfiles BTB domain profile. 86 145 IPR000210 GO:0005515
Pvu8g1659 249 PANTHER OS08G0103600 PROTEIN 10 249 - -
Pvu8g1659 249 Gene3D Potassium Channel Kv1.1; Chain A 60 213 IPR011333 -
Pvu8g1659 249 SUPERFAMILY POZ domain 69 182 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1659 Pvu-Chr8 41056405 41057777 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pvu8g1659 BTB 1.5e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1659 K10523 - gmx:100786905 409.453