Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1653 ATGTCAAGCAATGCATTAACTCTTTTTATCTTGTTGCTTAAAATCTCCTTGTTTCCAGCCGCTTCTGCTTTGAACCAGGAAGGTCTCTCTCTACTTTCATGGCTCTCAACTTTCAATTCCTCTGATTCTGCTGCTGCATTTTCTTCATGGGATTCAACTCACCAAAGTCCGTGCAGATGGGTCTACGTAAAATGTTCCAAAGAAGGGTCTGTTTCAGAGATCATAATAGCATCCATTGATCTTCACACCACCTTCCCTACACAGCTCCTTTCTCTTGGCAACCTTACCACTCTAGTCATCTCAAATGCAAATCTTACCGGTGAGATTCCCAGTTCACTGGGAAACTTGTCATCCCTGGTTACTTTGGACCTCAGCTTCAATTCTTTATCAGGAAGCATTCCAGCTGAAATAGGAAATTTATACAAGCTGCAGTGGCTATATATGAATTCAAATTCCTTGCAAGGTGGAATTCCATCCCAAATTGGAAACTGTTCAAAGCTGAGGCAGCTGGAACTGTTTGATAATCAGCTCTCTGGTGTGATTCCAGGAGAAATAGGCCAGTTGAGGAATCTTGAAACGCTTCGGGCAGGTGGAAACCCAGGTATCCATGGTGATATTCCAATGCAGATATCAAACTGCAAGGCTCTAGTTTATTTAGGCCTAGCTGATACTGGGATATCAGGGGAGATTCCACCAACTATAGGAGAACTCAAAAGTCTCAAGACACTTCAAATCTACACTGCACAGCTCAGAGGTCACATTCCACCAGAAATTCAAAACTGCTCAGCCTTGGAGGAGTTGTTTCTCTATGAAAACCAACTTTCTGGAAATATTCCTTCCGAATTGGGTTCCATTAAGAGACTCAGGAAGGTACTTTTGTGGCAGAATAATTTCACTGGGAAAATCCCAGAAAGTCTGGGGAACTGTACAAGCCTGAGAGTTATAGATTTTTCTTTGAACTCTTTGGTTGGAGAACTTCCTGTGACTCTCAGTAGTCTAATCTTGTTGGAGGAGCTTCTGCTGTCTAATAATAACATTTTTGGAGAGATACCTTCCTATATCGGGAACTTCTCCAGTTTGAAGCAACTGGAATTGGATAATAACAGATTTACTGGGGAGATTCCACCTCTCTTGGGGCAGCTGAAGGAACTCACCTTGTTCTATGCCTGGCAAAATCAGCTCCATGGAAGCATACCAGCAGAACTCTCCAACTGTGAGAAACTTCAAGCACTTGATCTTTCACATAATTTCCTTACTGGGTCCATTCCAAGTTCACTATTTCATCTAGAGAACTTAACTCAGTTGTTGTTGTTATCAAATAGACTTTCAGGTCAAATTCCTCCAGATATCGGCAGTTGCACCAGCTTGATCAGGCTAAGGCTGGGATCAAACAACTTCACTGGTCAAATTCCACCAGAAATTGGCTTTTTGAGAAGTTTGAGCTTTCTTGAATTATCGGATAATGTACTCAGTGGAGATATACCCTTTGAGATAGGTAACTGTGCTAAGCTAGAGATGCTCGACTTACACAGCAATAAATTGCTAGGAGCAATTCCTTCCTCATTAGAATTCTTAGTTGGTCTTAATGTCTTGGATCTTTCTGCAAACAGAATAACTGGCCGCATCCCTGAAAATTTAGGCAAGTTAGCATCTCTAAATAAGTTGATACTCAGTGGAAACCAAATCACAGGTTTAATCCCTCAGTCACTGGGCTTTCGTAAGGGTTTGCAGTTGCTTGACCTAAGCAACAATAGGATCAGTGGTTCTATTCCTGATGAGATTGGTCATTTGCAAGAATTAGATATCCTCTTGAACTTGAGCTGGAATTGTTTAACAGGCCCCATCCCAGAGACCTTCTCAAATCTATCAAGACTTTCCAACTTGGACCTCTCTCACAACAAGCTCACGGGGAGTCTTAGAGTACTGGGTAGTCTTGACAATCTAGTTTCTCTTAATGTCTCCTACAACAGTTTTTCTGGTTCTCTTCCTGATACAAATTTCTTCAGGGATCTTCCCCCTGCTGCAATTGCTGGCAACCCCGACCTATGTATTACCGAGTGTCAAATAAGTGGACATCACCAAGGAATCAAGTCAATAAGAAACATTATCTTATATACTTTCCTTGGTGTTATTTTCACTTCTGGGTTTGTTACTTTTGGAGTAATCTTGGCAATGAAAATTCATGGGGGTAGTAACTTTGACGGTGAAATGCAATGGGCATTTACTCCTTTTCAAAAGCTCAACTTCTCCATCAATGACATCATCCCAAAGTTATCAGATTCAAACATTGTAGGAAAGGGTTGCTCAGGAGTCGTTTACCGTGTGGAGACTACAACAAACCAGGTTGTTGCAGTGAAGAAGCTGTGGCCACGAAAGAATGATGAGCCACCGGAGAGAGACCTCTTTACTGCTGAAGTTCACACCCTTGGATCAATAAGGCACAAAAATATAGTGAGACTTTTAGGATGCTACAACAATGGAAGAACTAGATTGCTCTTATTTGATTACATATGCAATGGGAGTTTGTCTGGATTGCTCCATGAAAGTAGTTTGTTCTTGGACTGGGATGCAAGATATAAGATCATTCTAGGAGCTGCTCATGGATTAGAATATCTTCATCATGATTGTATCCCTCCAATTATTCATAGAGACATTAAGGCTAACAACATCTTGATAGGTCCACAATTTGAAGCTTTTCTTGCAGATTTTGGCCTTGCAAAACTTGTTGGTTCCTCTGATAATTCCGGAGCTTCTGCTATAGTTGCAGGTTCTTATGGATACATAGCTCCTGAATATGGATACAGTTTAAGGATCACAGAGAAGAGTGATGTGTATAGCTTTGGTGTAGTTATCATTGAGGTCTTAACAGGGATGGAGCCAATAGATAGAAGGATTCCAGAAGGTTCCCACATTGTCCCTTGGGTTATGAGAGAAATCAGAGAGAAGAGAAGAGAATTTGAATCAATTCTGGACCAGAAACTGGCACTGCAGTCTGGAACACAAATTCCTGAGATGCTTCAAGTGCTAGGGGTGGCTCTCCTCTGTGTTAATCCATCACCTGATGAAAGACCTACAATGAAAGATGTAACAGCAATGCTCAAGGAAATCAGACATGAAAATGTGAATTTTGATTTTGAGAAGTCAAATCTTCTACAAAAAGGTGTTATTAACAATCCAAAAGCTTCAATTCAATGTCCAAGCTTCTCCAGATCTTGTAAACCTCTAACTGAAACACCATCTTCTTCAGTGTCACCAAATTAA 3261 0.41 MSSNALTLFILLLKISLFPAASALNQEGLSLLSWLSTFNSSDSAAAFSSWDSTHQSPCRWVYVKCSKEGSVSEIIIASIDLHTTFPTQLLSLGNLTTLVISNANLTGEIPSSLGNLSSLVTLDLSFNSLSGSIPAEIGNLYKLQWLYMNSNSLQGGIPSQIGNCSKLRQLELFDNQLSGVIPGEIGQLRNLETLRAGGNPGIHGDIPMQISNCKALVYLGLADTGISGEIPPTIGELKSLKTLQIYTAQLRGHIPPEIQNCSALEELFLYENQLSGNIPSELGSIKRLRKVLLWQNNFTGKIPESLGNCTSLRVIDFSLNSLVGELPVTLSSLILLEELLLSNNNIFGEIPSYIGNFSSLKQLELDNNRFTGEIPPLLGQLKELTLFYAWQNQLHGSIPAELSNCEKLQALDLSHNFLTGSIPSSLFHLENLTQLLLLSNRLSGQIPPDIGSCTSLIRLRLGSNNFTGQIPPEIGFLRSLSFLELSDNVLSGDIPFEIGNCAKLEMLDLHSNKLLGAIPSSLEFLVGLNVLDLSANRITGRIPENLGKLASLNKLILSGNQITGLIPQSLGFRKGLQLLDLSNNRISGSIPDEIGHLQELDILLNLSWNCLTGPIPETFSNLSRLSNLDLSHNKLTGSLRVLGSLDNLVSLNVSYNSFSGSLPDTNFFRDLPPAAIAGNPDLCITECQISGHHQGIKSIRNIILYTFLGVIFTSGFVTFGVILAMKIHGGSNFDGEMQWAFTPFQKLNFSINDIIPKLSDSNIVGKGCSGVVYRVETTTNQVVAVKKLWPRKNDEPPERDLFTAEVHTLGSIRHKNIVRLLGCYNNGRTRLLLFDYICNGSLSGLLHESSLFLDWDARYKIILGAAHGLEYLHHDCIPPIIHRDIKANNILIGPQFEAFLADFGLAKLVGSSDNSGASAIVAGSYGYIAPEYGYSLRITEKSDVYSFGVVIIEVLTGMEPIDRRIPEGSHIVPWVMREIREKRREFESILDQKLALQSGTQIPEMLQVLGVALLCVNPSPDERPTMKDVTAMLKEIRHENVNFDFEKSNLLQKGVINNPKASIQCPSFSRSCKPLTETPSSSVSPN* 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1653 1086 SMART serkin_6 758 1033 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1653 1086 Pfam Leucine Rich Repeat 407 429 IPR001611 GO:0005515
Pvu8g1653 1086 Pfam Leucine Rich Repeat 597 622 IPR001611 GO:0005515
Pvu8g1653 1086 ProSitePatterns Protein kinases ATP-binding region signature. 764 792 IPR017441 GO:0005524
Pvu8g1653 1086 SUPERFAMILY Protein kinase-like (PK-like) 754 1043 IPR011009 -
Pvu8g1653 1086 Gene3D Ribonuclease Inhibitor 335 405 IPR032675 -
Pvu8g1653 1086 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Pvu8g1653 1086 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
Pvu8g1653 1086 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 1053 - -
Pvu8g1653 1086 SUPERFAMILY L domain-like 40 374 - -
Pvu8g1653 1086 SMART LRR_typ_2 574 597 IPR003591 -
Pvu8g1653 1086 SMART LRR_typ_2 140 164 IPR003591 -
Pvu8g1653 1086 SMART LRR_typ_2 116 139 IPR003591 -
Pvu8g1653 1086 SMART LRR_typ_2 357 381 IPR003591 -
Pvu8g1653 1086 SMART LRR_typ_2 622 645 IPR003591 -
Pvu8g1653 1086 SMART LRR_typ_2 525 548 IPR003591 -
Pvu8g1653 1086 SMART LRR_typ_2 549 572 IPR003591 -
Pvu8g1653 1086 SMART LRR_typ_2 477 501 IPR003591 -
Pvu8g1653 1086 SMART LRR_typ_2 429 453 IPR003591 -
Pvu8g1653 1086 SMART LRR_typ_2 333 356 IPR003591 -
Pvu8g1653 1086 Pfam Protein kinase domain 761 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1653 1086 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Pvu8g1653 1086 ProSiteProfiles Leucine-rich repeat profile. 624 646 IPR001611 GO:0005515
Pvu8g1653 1086 Gene3D Phosphorylase Kinase; domain 1 740 836 - -
Pvu8g1653 1086 SUPERFAMILY L domain-like 575 685 - -
Pvu8g1653 1086 ProSitePatterns Serine/Threonine protein kinases active-site signature. 880 892 IPR008271 GO:0004672|GO:0006468
Pvu8g1653 1086 ProSiteProfiles Leucine-rich repeat profile. 575 597 IPR001611 GO:0005515
Pvu8g1653 1086 SUPERFAMILY L domain-like 274 600 - -
Pvu8g1653 1086 PANTHER LRR RECEPTOR-LIKE KINASE 3 1053 - -
Pvu8g1653 1086 PRINTS Leucine-rich repeat signature 576 589 - -
Pvu8g1653 1086 PRINTS Leucine-rich repeat signature 622 635 - -
Pvu8g1653 1086 ProSiteProfiles Leucine-rich repeat profile. 407 429 IPR001611 GO:0005515
Pvu8g1653 1086 Gene3D Transferase(Phosphotransferase) domain 1 837 1055 - -
Pvu8g1653 1086 Gene3D Ribonuclease Inhibitor 200 334 IPR032675 -
Pvu8g1653 1086 Gene3D Ribonuclease Inhibitor 406 691 IPR032675 -
Pvu8g1653 1086 SMART LRR_sd22_2 116 142 - -
Pvu8g1653 1086 SMART LRR_sd22_2 405 434 - -
Pvu8g1653 1086 SMART LRR_sd22_2 622 647 - -
Pvu8g1653 1086 SMART LRR_sd22_2 525 548 - -
Pvu8g1653 1086 Gene3D Ribonuclease Inhibitor 23 199 IPR032675 -
Pvu8g1653 1086 ProSiteProfiles Protein kinase domain profile. 758 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1653 Pvu-Chr8 40788373 40792051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1653 23 1071 Receptor kinase-like Gene Family AT5G56040 47.081 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu8g1653 Pkinase 2.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1653 - - gmx:100814382 1891.32