Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1650 ATGGCTAGGAGCTGGCTTATTGACTTTGGAGGATTTGCAAAGAAAGTGAAAAGCAATTCTCTATCTTCAGCTGATCAAATCAAGGATTGTGGGGCATATCGTGAATGTCCTAACTGTCATTATCGTATTGGAAACAGTGATGTTTCTGGTGAGTGGCCTGGCTTTCCTCTTGGTGTAAAGTTTGATCCTTCTGATGTAGAACTCTTAGAACATTTATCTGGAAAATGTGGTGTTGGAAACACACAGCCAGATATGTTTATCAACGAGTTCATCACAACTCTGGAAGGAGACCAAGGTATTTGCTACACTCATCCAGAAAATCTTCAAGGTGCTAAGAAAGATGGGAGTTATTTCCATTTCTTTCACAGGACAATCAATGCTTATGCTACTGGTCAAAGAAAGCGAAGAAAGATTCATCATCAACAGGGTGTGACTGAAGAACATTGGCGTTGGCACAAGACTGGTAAGACGAAAGCTATAATAGAAAATGGAATTTGCAAAGGCTTTAAGAAAATCATGGTTCTTCATGTAAGATCTAAGAGTGGGTTCAAACCCTACAAATCCAACTGGGTAATGCACCAGTATCATCTAGGGACTGAAGAAGATGAAAAGGAAGGTGAATATGTGGTTTCTAAAATTTTTTATCAACAGCAAAAGAAGACTGAGAAAAATGAGGACAATCCAATGGTTGAAGATCCTGACAATATAGTGTCAAGAACAGGTCCAAGGACTCCAAAACCAAACCCCCCCAATCCACCTCGTGCCGGAAACTCGGCTGATTGTGATGATTACATTGATGAAACTGTACCTCTGCCTTCTGCCCAGGATACCAAGGCAATCCTTGGAGAATCACTTGCCCCAATATCTGATAATCACGATCTAGACAGTTCTGCATGGTTAGCTGGCGAATCACAAGCTGTGGAACACATTGAATATGATGGCTTGGACGACATATTATTGTGCAAGGAAATCTTAGATTCTTCTGCTCTGTTAAATGATTCTGGATTAGACTCCAGCAATCTCTATGACTTAGCATTCTATGATAACCAAATGGCTAGAAATGATAACGAATCTTGCGGAATTTCTGTCCTGGATACGCTGGAATTAGACACTCCAGATTTTGATCTTTCTAATTTCAATTTTTGTTCTCAAGACAGTATCCTTCAGTGGATGGGAAGGTTGTGA 1185 0.4025 MARSWLIDFGGFAKKVKSNSLSSADQIKDCGAYRECPNCHYRIGNSDVSGEWPGFPLGVKFDPSDVELLEHLSGKCGVGNTQPDMFINEFITTLEGDQGICYTHPENLQGAKKDGSYFHFFHRTINAYATGQRKRRKIHHQQGVTEEHWRWHKTGKTKAIIENGICKGFKKIMVLHVRSKSGFKPYKSNWVMHQYHLGTEEDEKEGEYVVSKIFYQQQKKTEKNEDNPMVEDPDNIVSRTGPRTPKPNPPNPPRAGNSADCDDYIDETVPLPSAQDTKAILGESLAPISDNHDLDSSAWLAGESQAVEHIEYDGLDDILLCKEILDSSALLNDSGLDSSNLYDLAFYDNQMARNDNESCGISVLDTLELDTPDFDLSNFNFCSQDSILQWMGRL* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1650 394 ProSiteProfiles NAC domain profile. 55 216 IPR003441 GO:0003677|GO:0006355
Pvu8g1650 394 Gene3D NAC domain 64 221 IPR036093 GO:0003677|GO:0006355
Pvu8g1650 394 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 1 392 - -
Pvu8g1650 394 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 392 IPR044799 GO:0003700
Pvu8g1650 394 SUPERFAMILY NAC domain 41 216 IPR036093 GO:0003677|GO:0006355
Pvu8g1650 394 MobiDBLite consensus disorder prediction 219 262 - -
Pvu8g1650 394 Pfam No apical meristem (NAM) protein 56 197 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1650 Pvu-Chr8 40632408 40636599 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1650 33 220 NAC Transcription Factor Family AT4G28500 52.632 2.09e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu8g1650 NAM 2.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1650 - - gmx:100780442 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1650 8 40632408 40636599 Pvu8g1650 8 40632408 40636599 ECH