Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1647 ATGGAATATGGCAAATTGGGCCCCGCCGACCCAGGTGGCTCCTCCCGCCGCTCCACCACTCCTCTTACCAAACCAACCCCCTCTTCATCCTCCGCAACCACCAAAAGAAAACTCATCATGCTCTCTCTTCTCGCAACCGCCTTAATCGTCGCCGCTGCCATCTCCGCCGTCCTTGTTACAGTGGTCCGCTCCCGCGCCTCCAGTAACCAAAACGGGCCCAGCCTATCCCGCAAGCCTACTCAGGCAATTTCCCGAACCTGCAGCAAGACACGTTTCCCCACCTTATGTGTCAACTCCCTTCTTGACTTTCCCGGCTCCACCACTGCCTCGGAGCAAGACCTCGTCCACATCTCATTCAACATGACCCTACGACACGTCAGCAGAGCGTTCTTCGCCTCCTCTGGCCTCTCCTTCGCGGCCACCGAACCCAAAGTTCGGGCTGCGTACGAAGATTGCCTCGAGTTATTGGAGGAGTCCATGGACTCTCTTTCCCGATCCCTGGACTCCATCCTCTCGCCTTCGGCTATATCTAACGGCGGCGGATTGAGATCTGGCTCTGATGGATCTACCGAAGATGTGATAACGTGGCTCAGCGCCGCTCTCACTAATCATGACACGTGTGCGGAGGGGTTCGAGGAGTCGAGCGGGAGCGTGAAGAACCAGATGGTTAATAACTTGAAGGACTTGTCTGAACTGGTGAGTAATTGTCTCGCGATATTTTCTGGGAGTGGAAGTGGCGATTTCTCGGGGGTGCCGATTCAGAATAAGAGACGATTAATGGGAGAGGAAGATGATGAAGCGAATATATCGGGGAAATTCCCGAGATGGTTGAATAAACGTGATAGAAGATTATTGAATTTAGCAACGTCAGCAATTCAAGCGGATATAGTGGTGTCTAAGAATGGTGAAGGAACAGTGAAGACAATTGCGGAGGCTATTAAGAAAGCGCCGGAACACAGCAGTCGCCGGTTCATCATTTACGTGAGGGCAGGAAGGTATGAGGAGAATAATTTAAAGGTGGGCAGAAAGAAAACGAATGTGATGTTCATAGGAGATGGGAAGGGCAAAACTGTCATTACAGGGAAAAGGAATGTGATAGACGGCATGACCACATTCCACACAGCATCCTTCGCTGCAAGTGGTGCTGGATTCATTGCACGAGACATCACGTTCGAGAACTATGCTGGACCGGCGAAGCACCAAGCGGTGGCGCTCCGTGTCGGAGCCGACCACGCGGTGGTGTATCGGTGCAACATTGTGGGGTACCAAGACTCATGCTACGTCCACTCTAATCGTCAATTTTTTCGTGAATGTGACATTTACGGTACTGTAGACTTCATATTCGGCAATGCTGCGGTCGTGTTCCAGAAGTGCAACATATATGCTCGTAAGCCCATGGCCCAGCAGAAGAACACCATTACAGCCCAAAATAGAAAGGACCCGAATCAGAATACGGGCATATCCATGCACAATTGTCGGATCCAACCCGCTCCGGATCTTGTGCCGGTTAAGGGCAGCTTCCCCACCTATTTGGGCCGTCCATGGAAGCAGTTCTCCAGAACAGTGTTCATGTTATCCTACATGGGTGACCACATACATTCCCGTGGATGGTTGGAATGGAATGGAGACTTTGCTTTGGACACATTGTATTATGGTGAGTACATGAATTATGGGCCCGGTGCAGGTGTGGGCCAACGGGTCAAATGGCCTGGGTACCGGGTCATTACCTCTGCTGTGGAGGCAAATAGGTTCACGGTGGCCCAGTTTATATCTGGGTCAGCCTGGTTACCATCCACTGGAGTGGCTTTTGCGGCCGGGTTATCCGCATGA 1830 0.5191 MEYGKLGPADPGGSSRRSTTPLTKPTPSSSSATTKRKLIMLSLLATALIVAAAISAVLVTVVRSRASSNQNGPSLSRKPTQAISRTCSKTRFPTLCVNSLLDFPGSTTASEQDLVHISFNMTLRHVSRAFFASSGLSFAATEPKVRAAYEDCLELLEESMDSLSRSLDSILSPSAISNGGGLRSGSDGSTEDVITWLSAALTNHDTCAEGFEESSGSVKNQMVNNLKDLSELVSNCLAIFSGSGSGDFSGVPIQNKRRLMGEEDDEANISGKFPRWLNKRDRRLLNLATSAIQADIVVSKNGEGTVKTIAEAIKKAPEHSSRRFIIYVRAGRYEENNLKVGRKKTNVMFIGDGKGKTVITGKRNVIDGMTTFHTASFAASGAGFIARDITFENYAGPAKHQAVALRVGADHAVVYRCNIVGYQDSCYVHSNRQFFRECDIYGTVDFIFGNAAVVFQKCNIYARKPMAQQKNTITAQNRKDPNQNTGISMHNCRIQPAPDLVPVKGSFPTYLGRPWKQFSRTVFMLSYMGDHIHSRGWLEWNGDFALDTLYYGEYMNYGPGAGVGQRVKWPGYRVITSAVEANRFTVAQFISGSAWLPSTGVAFAAGLSA* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1647 609 Pfam Pectinesterase 295 592 IPR000070 GO:0030599|GO:0042545
Pvu8g1647 609 PANTHER PECTINESTERASE 23 607 - -
Pvu8g1647 609 Gene3D Invertase/pectin methylesterase inhibitor family protein 80 242 IPR035513 -
Pvu8g1647 609 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 81 241 IPR035513 -
Pvu8g1647 609 SMART PMEI_2 78 239 IPR006501 GO:0004857
Pvu8g1647 609 MobiDBLite consensus disorder prediction 13 31 - -
Pvu8g1647 609 Gene3D - 288 607 IPR012334 -
Pvu8g1647 609 MobiDBLite consensus disorder prediction 1 31 - -
Pvu8g1647 609 SUPERFAMILY Pectin lyase-like 289 606 IPR011050 -
Pvu8g1647 609 TIGRFAM PME_inhib: pectinesterase inhibitor domain 56 240 IPR006501 GO:0004857
Pvu8g1647 609 ProSitePatterns Pectinesterase signature 2. 440 449 IPR033131 -
Pvu8g1647 609 CDD PMEI-like_3 87 239 - -
Pvu8g1647 609 Pfam Plant invertase/pectin methylesterase inhibitor 82 239 IPR006501 GO:0004857
Pvu8g1647 609 PANTHER PECTINESTERASE 23 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1647 Pvu-Chr8 40578635 40583053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1647 1 608 Carbohydrate Esterase AT5G53370 63.089 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1647 - - gmx:106796002 977.237