Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1621 ATGAACACCAAAAGCATCACCTCAAATCCACCATGGATTCTCTTCACTACACTTTTTCTCTCGTCTTTCTCCCTCTCACTCTCCGATCCAAGAATCACCGAAGCAGGACTCTACTGTGGAACCACCAAGGCCCCTCTGAAAGCCAACTACATACCAAGTTTCACCAAGGAAATGGAGAGCATCTCGCAGTTGGTGACCAACCACAACTGGGGCACTCACGTTGTCAACATTTCAGGCTCGTCCATTCCAATTTATGGCTTTGCACAATGCTTCAAGGACCTCTCTAACACCGATTGCCTTCTCTGCTACGCCGCAAGCCGTACCAAGCTTCCACGCTGCCTACCTTCTGTCTCTGCGCGCATCTACCTAGATGGCTGCTTCTTGCGCTATGACAACTACAGCTTCTATGCGGAGGTTAGTGACCCTTTGAGGGATACACTGAACTGCACCTCACAGCATGGGACGGTTGTTGATAAAACTGAGAGGTTGGAACTTGAGGAGAGCGTTGGAAGGGTAGTTGAGAGTGTGACCAACAGGGCTCTGGCAAAAGGTGGTGGCTTTGCTGTGGGCGAGGTTGAGGGGGTTTATGCATTGGCACAGTGCTGGAATACCATTGGGAGTGATGGGTGTAGAGAGTGTTTGAGGAAAGCTGGGAAGGAGGTGAGAGGGTGCTTGCCAAAGAGGGATGGGAGGGCCTTGAATGCTGGCTGTTATTTGAGGTATTCAACAAATAAGTTCTACAATGAAGATGGCGATGCAGGTGGTAAAAATGGATTCTTAAGAAGAGGAGTCATAATCGCAGAAGTGTTAGCAGCAGCTGCAGTTTTAATGCTTATCCTCTCCGCCTCCTATGTAGCCTTCACAAAATTAACTAGGATAAAAAAAGAAAACAATAATCTTGGTCATATTTCCTCTTCCATAAGCAAATCTAGCTTGAATTACAAGTACGAAACTCTTGAGAAGGCCACAGATTATTTTAACTCTTCAAGGAAATTAGGCCAAGGTGGAGCTGGCTCAGTTTTCAAAGGTATTCTCCCAAATAAGAAAGTTATTGCGGTTAAGAGATTGATCTTCAATAACAGGCAATGGGTGGATGAGTTCTTCAACGAAGTGAATTTGATTAGCGGAATTGAACACAAGAACCTTGTCAAACTATTGGGATGTAGCATTGAAGGCCCTGAGAGCCTCCTTGTGTATGAGTACTTGCCCAAAAAGAGTTTAGACCAATTTATCTTCGAAAAAAACAGAACTCAGATTCTAAACTGGAAGCAGAGGTTTAATATCATTCTTGGAACTGCAGAGGGGCTTGCATATCTTCATGAAGGTACCAAAATAAGAATCATCCATCGAGATATCAAAAGCAGCAATGTTCTTCTGGACGACAATCTCACTCCCAAGATTGCAGATTTCGGCCTTGTCCGGTGTTTTGGAGCTGATAAGTCCCATTTGAGCACTGGAATTGCCGGAACACTAGGTTACATGGCTCCTGAGTACCTAATCAGAGGACAACTTACTGATAAAGCTGATGTGTATAGTTTTGGAGTACTTGTTCTAGAGGTTGTATGTGGGAGGAGGAATAATGTCTTCCGAGAGGACTCCGGCTCGCTTCTACAAACTGTTTGGAAACTTTACCGATCAAACACATTAACTGAAGCTGTTGATCCTTGCTTGGGAGATGATTATCCTGCAACTGAAGCATCAAGGGTGTTTCGAATTGGATTGCTTTGCACACAAGCTTCTGCCTCCCTAAGACCATCCATTTCTCAAGTTGTTTACATGCTAACTAATTCAAATGAAGACGTTCCCACTCCAAACCAGCCCCCATTTTTGAGCACTGGAATGCTGGACTCAGATGGTTCCAAGTCTTATACCACTAACAGCTTCATATCCAATGCCTTGAAGAAGATTGGAGTATCCTACATCTACTCAGAGTCCTCTAGTTCACGCAACTCAGATGGGCCATCAAGAAGTGAAGAATCAATTGTTCAAGTTTGA 1995 0.4451 MNTKSITSNPPWILFTTLFLSSFSLSLSDPRITEAGLYCGTTKAPLKANYIPSFTKEMESISQLVTNHNWGTHVVNISGSSIPIYGFAQCFKDLSNTDCLLCYAASRTKLPRCLPSVSARIYLDGCFLRYDNYSFYAEVSDPLRDTLNCTSQHGTVVDKTERLELEESVGRVVESVTNRALAKGGGFAVGEVEGVYALAQCWNTIGSDGCRECLRKAGKEVRGCLPKRDGRALNAGCYLRYSTNKFYNEDGDAGGKNGFLRRGVIIAEVLAAAAVLMLILSASYVAFTKLTRIKKENNNLGHISSSISKSSLNYKYETLEKATDYFNSSRKLGQGGAGSVFKGILPNKKVIAVKRLIFNNRQWVDEFFNEVNLISGIEHKNLVKLLGCSIEGPESLLVYEYLPKKSLDQFIFEKNRTQILNWKQRFNIILGTAEGLAYLHEGTKIRIIHRDIKSSNVLLDDNLTPKIADFGLVRCFGADKSHLSTGIAGTLGYMAPEYLIRGQLTDKADVYSFGVLVLEVVCGRRNNVFREDSGSLLQTVWKLYRSNTLTEAVDPCLGDDYPATEASRVFRIGLLCTQASASLRPSISQVVYMLTNSNEDVPTPNQPPFLSTGMLDSDGSKSYTTNSFISNALKKIGVSYIYSESSSSRNSDGPSRSEESIVQV* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1621 664 SUPERFAMILY Protein kinase-like (PK-like) 309 616 IPR011009 -
Pvu8g1621 664 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 22 657 - -
Pvu8g1621 664 CDD STKc_IRAK 332 596 - -
Pvu8g1621 664 ProSiteProfiles Gnk2-homologous domain profile. 144 246 IPR002902 -
Pvu8g1621 664 ProSiteProfiles Protein kinase domain profile. 326 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1621 664 Pfam Salt stress response/antifungal 164 243 IPR002902 -
Pvu8g1621 664 Pfam Salt stress response/antifungal 53 133 IPR002902 -
Pvu8g1621 664 Gene3D Phosphorylase Kinase; domain 1 285 401 - -
Pvu8g1621 664 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 22 657 - -
Pvu8g1621 664 Pfam Protein kinase domain 327 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1621 664 Gene3D - 35 135 IPR038408 -
Pvu8g1621 664 Gene3D - 148 246 IPR038408 -
Pvu8g1621 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Pvu8g1621 664 Gene3D Transferase(Phosphotransferase) domain 1 402 605 - -
Pvu8g1621 664 MobiDBLite consensus disorder prediction 644 664 - -
Pvu8g1621 664 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Pvu8g1621 664 SMART serkin_6 326 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1621 Pvu-Chr8 39002889 39006862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1621 3 491 Receptor kinase-like Gene Family AT5G40380 56.327 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu8g1621 Pkinase 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1621 - - gmx:100790404 1085.48