Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1617 ATGGAGTTTAGTCCAAGCTTTCCTGAGAAAATTCACTACCTTTCTGGGATTTTCCCTGAAATCAAATCAGAGATTCCTGCGTCAGAAGAGAACACCAGCTTCATGTATCAAAACAATTTCAACCATTTCCAGCACCACCATCATCACCTGAATGAGCCAAATCAGGGTCACCCTGAAAGTTTTTTCACAGAGGGTCCTTCCTCCATCATCAACCCATTATTCTCTTTGTCCTCAGCAAACCATTCTTCAGGTGGACCATCTTCCTACAAATCCACTTACCCCAATGAATCCCTCAAAGGAGGCTATGCCAACCCCTACTACCCCATGCCTTATGCACCAAACAACACCAATGTTGAATCCATGCATGGTCACCCCAACAAGGTCATCTGGGACTTTTCCCAGAAAGTTCCCCTTCACTCTGGCCCAAGTGCAACTTCAGATCCTCAGGTGCAGAGGAAGACTAATGGCCAAATTCAACACAGGGTGACCAACATAATCAAAGGCCAGTGGAGTGCTGAGGAGGACAGCGTCCTTGTCCAATTGGTGAAACGCTTTGGGATCAAAAAATGGTCCCATATCGCCAAGTTGCTGAATGGCAGGGTTGGGAAACAGTGCAGAGAGAGGTGGCACAATCATCTCCGGCCAAACATTAGGAAGGAGTCATGGAGCGAAGAGGAGGACAAAATCCTGATTGAAGCTCACAAGGAACTCGGGAACAAATGGGCAGAGATTGCAAGGAGAATGCCGGGAAGGACTGAAAACACCATCAAGAACCACTGGAACGCTACCAAGCGTCGCCAGAAGGCCAAGAGGCAGAGGAGCAAGCGGAGGAGCTCCAAGGGTGCACCCACGCTTCTCGAGAGCTACATAAGGAAAGTCACTGCGGCGGAAGAGTCTGAGAAGGAATTGAAGAACTGCATGAGCAAGATGAACTTGAATGAGACCACCAATGCGGGTCTCTTTCGGGTTCGGTACGAGAGCTCCGAAGGTGACTTCAGCTCGGAGGAGGAGGAGGTTGGGTGGAGCCTGCAGCACCACGTGCCATGTGGTGGTGATGGTGGCTATGTGCCACTGATGGTCAACGCTGGGGAAGAGAGCCTGATTGATTACGAGGTTGCCTTGCAGATGGCACCGGAGGTCCAGATGAGGAAGGAGATGGATCTCATGGAGATGATCTATAGAAAAGGTTAA 1191 0.4979 MEFSPSFPEKIHYLSGIFPEIKSEIPASEENTSFMYQNNFNHFQHHHHHLNEPNQGHPESFFTEGPSSIINPLFSLSSANHSSGGPSSYKSTYPNESLKGGYANPYYPMPYAPNNTNVESMHGHPNKVIWDFSQKVPLHSGPSATSDPQVQRKTNGQIQHRVTNIIKGQWSAEEDSVLVQLVKRFGIKKWSHIAKLLNGRVGKQCRERWHNHLRPNIRKESWSEEEDKILIEAHKELGNKWAEIARRMPGRTENTIKNHWNATKRRQKAKRQRSKRRSSKGAPTLLESYIRKVTAAEESEKELKNCMSKMNLNETTNAGLFRVRYESSEGDFSSEEEEVGWSLQHHVPCGGDGGYVPLMVNAGEESLIDYEVALQMAPEVQMRKEMDLMEMIYRKG* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1617 396 PANTHER MYB PROTEIN-RELATED 79 311 - -
Pvu8g1617 396 MobiDBLite consensus disorder prediction 259 281 - -
Pvu8g1617 396 CDD SANT 170 213 IPR001005 -
Pvu8g1617 396 Gene3D - 166 218 - -
Pvu8g1617 396 SMART sant 218 266 IPR001005 -
Pvu8g1617 396 SMART sant 166 215 IPR001005 -
Pvu8g1617 396 ProSiteProfiles Myb-like domain profile. 214 264 IPR001005 -
Pvu8g1617 396 SUPERFAMILY Homeodomain-like 164 260 IPR009057 -
Pvu8g1617 396 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 164 213 IPR017930 -
Pvu8g1617 396 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 214 268 IPR017930 -
Pvu8g1617 396 MobiDBLite consensus disorder prediction 261 278 - -
Pvu8g1617 396 Pfam Myb-like DNA-binding domain 170 228 - -
Pvu8g1617 396 Gene3D - 220 284 - -
Pvu8g1617 396 ProSiteProfiles Myb-like domain profile. 162 213 IPR001005 -
Pvu8g1617 396 CDD SANT 221 264 IPR001005 -
Pvu8g1617 396 PANTHER MYB DOMAIN PROTEIN 100-RELATED 79 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1617 Pvu-Chr8 38447689 38452270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1617 163 293 MYB Transcription Factor Family AT4G18770 67.939 2.96e-62 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu8g1617 Myb_DNA-bind_6 2.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1617 K09422 - gmx:100793032 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1617 8 38447689 38452270 Pvu8g1617 8 38447689 38452270 ECH