Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1598 ATGTACATCATCTTCCTCAAACTGCTACTCTTCCTCACATGGGCTTCTTCTCCATCTCTTTCCACCTCCATCACCCAGCTTGATACTCTCTTGGCCATCAGAGACTCTCTAGACCCAGAGAACCGCGTGTTGCTCTCATGGAACTCCCATTCGGACCCCTGTAGTAGTGCCTCTTTTGAGGGTGTGGCTTGCAATGAGCAAGGCCTCGTTACCAATATTTCACTGCAAGGAAAGGGTCTATACGGAACAGTACCTCATGCTTTAGCTGCTCTCAAGAGCTTGACGGGTCTCTTCCTTCACTTCAATGCCCTCCATGGGATATTACCCAAGCAAATCACCACTTTGACTGACCTAACTGATTTGTATCTCAATGTCAATAACCTCTCTGGTGATATCCCTCGAGAGATTGGAAATATGTCAAATCTTCAAGTTTTGCAGCTTTGCTATAACAAGTTTAGGGGGAATATACCAAGTGAACTGGGAAGGCTGAGGAAGCTCAGTGTTGTTGCACTGCAATATAATGAATTAAATAGCGCCATTCCTGCGAGTTTGGGTGAAGTGGGGACATTGGCGCGATTGGATCTGAGCTTTAATAGCCTCTTGGGTCCAATTCCGGTGACATTGGCTGATGCAGCTAAACTCCAGAGTCTCAATGTTCGTAACAATTCTCTCTCTGGCCGTGTCCCTTCAGCTCTGAGAAGACTCAAAGGTGGGTTTGAGTACATGAACAATCCTGGTTTATGTGGGACTGGATTTGATGATTTAGATTCTTGCAAAGAAGTAAGCACTTCAGAACCGGTTAGACCCGAACCATATGAACCTGGTGACACTTCTACCAAAGATCTTCCTGCATCAATGGAACCACAACATGAAAGCTGTGGTCATTGTAAAAGGACGTCGAAATCTTCAAAAATTGGTCTGGTTTTTACCGTCATTGCAGTGGTTTTTGCTTCAACTGTTGCTGGACTGCTTTTGCTGTTTTGGCGACGCAGTCAGAATCAGAAAATTGGAAGTTCTGATAACGGGCCTAAACAAGTGTGTCAGAAAAGCGCGTTTCCTCTTATCAGTTTGGAGTATTCTGACGGTTGGGACCCATTAGAGAAAGGTGGAAGTGGGTATTCCTGGGAAGTTCTGGAAGGATTTATGTTTAACCTTGAAGAAGTAGAACGCGCAACTCAAATGTTCTCAGAGGTAAATTTATTGGGGAAGAGTGATTATTCAGCTGTGTACCGGGGGGTTTTGAGAGATGGTTCTGTTGTGACTATAAAGTGCATTGCCAAGACAAGTTGCAAATCTGATGAAGGTGAGTTCTTGAAAGGTTTGAAGATTTTGACCTCGTTAAGGCATGAAAATGTAGTTCGGTTGAGAGGGTTTTGCTGTTCAAAAGGGCGCGGGGAATGTTTTCTGATCTATGACTCTTTCTCTAATGGGAATTTGTTACAGTATCTTGATGCCAAGAGAAACAGTGGTAGGGTACTTGATTGGTCGACCAGAGTATGGATCATTCGTGGTATCGCCAAAGGTATGGATTATCTGCATAGGAAGAAAGGAAGGCAACATGGTAGAGTTCAGGAAAATATATCAGCTGAAAATATAGTTCTGGATTCTGGGTACAAGGCTTTAATTGGAGATTCAGGATTGCACAATATCCTTGAAGATGATGTTGTTTTTTCCGCCCTGAAAGGTAGCGCTGGCATGGGATATCTGCCTCCAGAGTACAGGAGAAGTGGTGGTTTGAGTGAAAAGAGTGATGTGTATGCCTTTGGAGTGATTGTTTTCCAGGTTCTGAGTGGAAAACGTGATATGAGGCAGTTAAATTTGGAAAGTGGTAGTTTGAAAGATATAGTTGATGAGAATCTTGAAGGGATGTTCTCAGAATCAGAGGCAGCCAAGCTGAGAAGAGTTGCTTTGCTTTGCACCCACGACTCCCCACATCTTCGACCATCTATGGACACCCTAATGCTACAACTGGATGCTCAACAGTAG 1986 0.4401 MYIIFLKLLLFLTWASSPSLSTSITQLDTLLAIRDSLDPENRVLLSWNSHSDPCSSASFEGVACNEQGLVTNISLQGKGLYGTVPHALAALKSLTGLFLHFNALHGILPKQITTLTDLTDLYLNVNNLSGDIPREIGNMSNLQVLQLCYNKFRGNIPSELGRLRKLSVVALQYNELNSAIPASLGEVGTLARLDLSFNSLLGPIPVTLADAAKLQSLNVRNNSLSGRVPSALRRLKGGFEYMNNPGLCGTGFDDLDSCKEVSTSEPVRPEPYEPGDTSTKDLPASMEPQHESCGHCKRTSKSSKIGLVFTVIAVVFASTVAGLLLLFWRRSQNQKIGSSDNGPKQVCQKSAFPLISLEYSDGWDPLEKGGSGYSWEVLEGFMFNLEEVERATQMFSEVNLLGKSDYSAVYRGVLRDGSVVTIKCIAKTSCKSDEGEFLKGLKILTSLRHENVVRLRGFCCSKGRGECFLIYDSFSNGNLLQYLDAKRNSGRVLDWSTRVWIIRGIAKGMDYLHRKKGRQHGRVQENISAENIVLDSGYKALIGDSGLHNILEDDVVFSALKGSAGMGYLPPEYRRSGGLSEKSDVYAFGVIVFQVLSGKRDMRQLNLESGSLKDIVDENLEGMFSESEAAKLRRVALLCTHDSPHLRPSMDTLMLQLDAQQ* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1598 661 Gene3D Ribonuclease Inhibitor 143 250 IPR032675 -
Pvu8g1598 661 SUPERFAMILY L domain-like 23 236 - -
Pvu8g1598 661 ProSiteProfiles Protein kinase domain profile. 395 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1598 661 MobiDBLite consensus disorder prediction 259 295 - -
Pvu8g1598 661 Gene3D Phosphorylase Kinase; domain 1 374 472 - -
Pvu8g1598 661 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 659 - -
Pvu8g1598 661 Gene3D Transferase(Phosphotransferase) domain 1 474 661 - -
Pvu8g1598 661 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Pvu8g1598 661 Gene3D Ribonuclease Inhibitor 25 139 IPR032675 -
Pvu8g1598 661 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 6 659 - -
Pvu8g1598 661 SUPERFAMILY Protein kinase-like (PK-like) 373 657 IPR011009 -
Pvu8g1598 661 Pfam Protein tyrosine and serine/threonine kinase 399 656 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1598 Pvu-Chr8 34135185 34137878 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1598 8 508 Miscellaneous Gene Families AT4G22730 46.935 9.50e-157 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Pvu8g1598 PK_Tyr_Ser-Thr 1.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1598 - - var:108327466 1125.92