Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1596 ATGGGGTCACCTGTTAATGGATTGGATTCTTTATCAGAGGTTCAGAATTCAGTTTCTGTGGTAGATCATGATCCTCCTTCAACATCAGGGATTCCCCGGCCATCTCGGCCACCGTTAAGCACATCTAGAAATTATGGGGCTTCATCCAGTCAGCATAACAATAACTATGGAATGAAGAGCATCCACCACCAAAAGCATTCATATCAGGAGGCTGACAACGTAGTGCGCGATGAAATGCCCAATATGGAGAAGCAGCACTATGACACAAATGGAAAATCTGAGTATGTGAGCCTCAATAAAGCTGTTGAAAGTTGTTTAGGAAAGAATATCTCCAAAATGGAAACAAAATTAAGTATGAAGCAACCGTTAGATGGTTCCAAGAATTGTGATTCTAGTGGCGACAATTGCAAATTAGTTTCGACAAAAGGGGTTGTTGATCGAACAAAGAGCAAGTGTGAGTCAGAGATTGGCTTTTGTCCAAGTCCTCAGAGTAGTTTCTATTCAGAAGCCAAGGAAAGTTTTGCCAACAATGGAGTGAGTGAATGTGTTAGTGTTGATAAGTCAGTGGAAAGTGGGGAAGTTACTAATTCCTGTGAATTTAACGAGAGCCGGAAGACCAGCATCTGTAGAGGCAGCACTGGAAGTGATGTTAGTGATGAGAGCAGCACTAGTAGTCTGAGCAGTGCTTTGTATAAGCCCCACAAGGCAAATGATATAAGATGGGAAGCAATTCAAGCCATCCGAGTTCGTGACGGGGTGTTGGAAATGCGACATTTCAGGTTATTGAAGAAATTGGGATGTGGAGACATAGGAAGTGTATATCTAGCTGAACTAAGTGGCACCAGGACTTGTTTTGCAATGAAAGTAATGAACAAAACAGAGTTGGCAAGTCGCAAGAAGCTTGTTAGGTCTCAGACAGAGAGAGAGATACTGCAGTCTCTAGATCATCCATTTCTGCCCACATTGTATACGCACTTTGAGACAGAGACATTCTCCTGCTTGGTAATGGAGTTTTGCCCTGGTGGGGACTTGCATGCACTCAGGCAAAGACAACCTGGGAAGTATTTTTCTGAGATTGCTGCCAGGTTTTATGTGGCAGAAGTTCTCCTTGCCTTAGAGTACTTGCACATGCTTGGGGTCATCTATAGAGATCTCAAGCCTGAGAATGTGTTGGTGAGAGAAGATGGACATATAATGCTTTCAGATTTTGATCTCTCTCTAAGGTGTGCTGTCAGTCCAACTCTTGTGAAGTCATCAAACTCTACCTTGGAGACAAAAAGCTCAGGATACTGCATTCAGCCTTCCTGCATTGAGCCAACCTGTGTAATACAGCCAGACTGCATTCAGCCATCATGCTTCACACCGCGATTTCTCTCCGGCAAATCCAAGAAAGAAAAAAAGTCGAAGCCAAAGAATGATGTGCAGAACCAGGTGACCCCTCTACCCGAGCTTATTGCCGAGCCCACGAATGCTCGATCAATGTCCTTTGTGGGAACACACGAGTACCTGGCACCTGAAATCATCAAAGGTGAAGGTCATGGTAGTGCTGTAGACTGGTGGACATTTGGGATATTCTTGTATGAACTCTTGTTCGGTAGAACGCCGTTCAAGGGTTCGGCAAACCGTGCAACACTATTCAATGTTGTTGGCCAGCCCTTGAAATTTCCAGAATCTCCCACTGTGAGCTTTGCTGCCAGGGACTTGATCAGAGGTTTGCTTGTGAAAGAACCTCAGAATCGGCTTGCTTATAGACGTGGAGCAACAGAAATAAAACAACATCCATTTTTTCATAATGTTAACTGGGCACTGATCCGATGTGCAAATCCTCCAGAGATTCCAAGACAGGCCATGAAAGCACTTGCAGCTGAAAAGGTGCCTGGAGTGAAGCCTTCTGGTAACTATTTAGATATTGATTTCTTTTGA 1923 0.441 MGSPVNGLDSLSEVQNSVSVVDHDPPSTSGIPRPSRPPLSTSRNYGASSSQHNNNYGMKSIHHQKHSYQEADNVVRDEMPNMEKQHYDTNGKSEYVSLNKAVESCLGKNISKMETKLSMKQPLDGSKNCDSSGDNCKLVSTKGVVDRTKSKCESEIGFCPSPQSSFYSEAKESFANNGVSECVSVDKSVESGEVTNSCEFNESRKTSICRGSTGSDVSDESSTSSLSSALYKPHKANDIRWEAIQAIRVRDGVLEMRHFRLLKKLGCGDIGSVYLAELSGTRTCFAMKVMNKTELASRKKLVRSQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEIAARFYVAEVLLALEYLHMLGVIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSTLETKSSGYCIQPSCIEPTCVIQPDCIQPSCFTPRFLSGKSKKEKKSKPKNDVQNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLKFPESPTVSFAARDLIRGLLVKEPQNRLAYRRGATEIKQHPFFHNVNWALIRCANPPEIPRQAMKALAAEKVPGVKPSGNYLDIDFF* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1596 640 MobiDBLite consensus disorder prediction 1 57 - -
Pvu8g1596 640 ProSiteProfiles Protein kinase domain profile. 259 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1596 640 SUPERFAMILY Protein kinase-like (PK-like) 235 615 IPR011009 -
Pvu8g1596 640 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 4 640 - -
Pvu8g1596 640 Gene3D Phosphorylase Kinase; domain 1 257 338 - -
Pvu8g1596 640 MobiDBLite consensus disorder prediction 34 57 - -
Pvu8g1596 640 CDD STKc_phototropin_like 257 616 - -
Pvu8g1596 640 Gene3D Transferase(Phosphotransferase) domain 1 491 613 - -
Pvu8g1596 640 Gene3D Transferase(Phosphotransferase) domain 1 339 408 - -
Pvu8g1596 640 PANTHER FLIPPASE KINASE 1-RELATED 4 640 - -
Pvu8g1596 640 Pfam Protein kinase domain 260 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1596 640 Pfam Protein kinase domain 493 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1596 640 SMART serkin_6 259 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1596 640 MobiDBLite consensus disorder prediction 1 24 - -
Pvu8g1596 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 380 392 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1596 Pvu-Chr8 34022413 34026578 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1596 163 640 AGC Kinase Gene Family AT5G47750 70.683 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pvu8g1596 Pkinase 6.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1596 K08286 - gmx:100802402 1140.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1596 8 34022413 34026578 Pvu8g1596 8 34022413 34026578 ECH