Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1591 ATGATCATGTCCTCTAGCCAAAACTTCCTTCGTTTTCCTCACTCCACCATTCACTTAACCCACATTCCCGAATGGAACACCTTCGTACCCTACATCTCTACCAAACCCCAAGTCCACTTTTTCTCCTCCTTCACCCACCCGGGTCGCTCCGAAACCTTCCGAATCATTGCCCCGAAAACCCTGTGCCAGCTCGGTCCCCTGTTCGCAAAACGGGTCGGGCTTTTGGGATCAATTCTACCCAGTGGAGGCTGGTGGGCCTTGCCGGAGCTCCGGGAAGACGGCGTGGAGACAACGGCGGCGCTGACTGCTCTCCGGCGTATATGGGAATTGGTCGCCGATGAGCGACGGGTCGCGTTTGTGGCGGTTGTGTCCCTTGTAATTGCTGCTCTTTCAGAAATCTCCATGCCAAGTATATTGGCAGCATCAATATTTTCAGCACAGAGTGGTGAGACTATGGCATTCTCTAGGAATGCACTGTTTTTGCTTCTTTTGTGTTTAACATCAGGGATATGCAGTGGCCTACGAAGTGGCTGCTTTGGAATTTTGAATGTAACCTTGGTAAAGCATCTACGAGAAAACTTATATACAACAATTCTTTTTCAGGACATCTCCTATTTTGATAAAGAAAGGGTTGGTGACTTGACAAGCAGGCTCACAGCAGATTGTCAAAGACTATCCCATGCAATAGGAAATGATCTTCAGCTGATATTACGCAACACTTGTCAGGGAATTGGAGCAATACTTAATTTGATGGTTTTATCTTGGCCTCTAGCATTATCTGCCTTGGTGATTTGTTCTATTTTATCTGCAATTTTCTTGGTTTATGTACAGTATCAGAGAAAGGCAGCAAAGTTAATCCAAGATTTCACAGCTTGTGCAAATGATGTTGCTCTGGAAACACTTTCTTCAATAAGAACTGTCCGAGCTTATGGAACAGGAAAAAGAGAATTTGGAAGGTACAAGCAATGGCTACAGAGCTTAGCACTTATAACTCTTCGAGAGAATGTGGCTTTTGGGTTTTGGGACCTCATATTTAGCACCTTATACCGTTCTATGCAGGTGGGCTTGAGCTTTCTGGGACAGGTTTGCTTTAAGCTCTCTTGGACATGTTTAGTTGGGCTCTCTCGGACAGGCAGATGTACCTGCAAGGTGCTCTGA 1158 0.4585 MIMSSSQNFLRFPHSTIHLTHIPEWNTFVPYISTKPQVHFFSSFTHPGRSETFRIIAPKTLCQLGPLFAKRVGLLGSILPSGGWWALPELREDGVETTAALTALRRIWELVADERRVAFVAVVSLVIAALSEISMPSILAASIFSAQSGETMAFSRNALFLLLLCLTSGICSGLRSGCFGILNVTLVKHLRENLYTTILFQDISYFDKERVGDLTSRLTADCQRLSHAIGNDLQLILRNTCQGIGAILNLMVLSWPLALSALVICSILSAIFLVYVQYQRKAAKLIQDFTACANDVALETLSSIRTVRAYGTGKREFGRYKQWLQSLALITLRENVAFGFWDLIFSTLYRSMQVGLSFLGQVCFKLSWTCLVGLSRTGRCTCKVL* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1591 385 Coils Coil 384 385 - -
Pvu8g1591 385 PANTHER ABC TRANSPORTER B FAMILY 56 364 - -
Pvu8g1591 385 Pfam ABC transporter transmembrane region 120 345 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu8g1591 385 PANTHER ATP-BINDING ABC TRANSPORTER 56 364 - -
Pvu8g1591 385 SUPERFAMILY ABC transporter transmembrane region 105 360 IPR036640 GO:0005524|GO:0016021
Pvu8g1591 385 Gene3D ABC transporter type 1, transmembrane domain 99 365 IPR036640 GO:0005524|GO:0016021
Pvu8g1591 385 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 119 360 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1591 Pvu-Chr8 33651390 33663973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1591 88 312 Calmodulin-binding Proteins AT2G36910 22.078 1.44e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1591 - - pvu:PHAVU_008G153500g 750.355