Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1584 ATGACAGGGAGGTACTGTTACAAGGAACTGCTTCCATTCACTGCAATGGTTGCCATAGAGTGCTCTAACGTTGGTGTAAATGTTCTATTCAAAAAAGCAACTGAGAAGGGGTTGAGTTATTATGCCTTCGTCGCTTATTCATACCTAATCTCTGCTCTCTTTCTCCTTTTGCCTCTCCCCTTCGTCTTTCGATGGTCAAGAAGCCTACACCTCAACCTCTCTCTCATCTTCAGAATTTTCCTCCTTGGAGTAATTGGAGTGATAGCTCAGCTTTGTGGATACAAGGGACTGAATTACACTTCGCCCACGCTTGCGTCTGCTCTCAGCAACCTCATACCAGCTTTTACCTTCATTTTGGCTATCATTTTCAGTGTATTTATTCTCTCTAGAAGGTAA 396 0.4318 MTGRYCYKELLPFTAMVAIECSNVGVNVLFKKATEKGLSYYAFVAYSYLISALFLLLPLPFVFRWSRSLHLNLSLIFRIFLLGVIGVIAQLCGYKGLNYTSPTLASALSNLIPAFTFILAIIFSVFILSRR* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1584 131 Pfam EamA-like transporter family 24 123 IPR000620 GO:0016020|GO:0016021
Pvu8g1584 131 PANTHER WAT1-RELATED PROTEIN 10 124 IPR030184 GO:0016021|GO:0022857
Pvu8g1584 131 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 123 - -
Pvu8g1584 131 PANTHER WAT1-RELATED PROTEIN 10 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1584 Pvu-Chr8 33395834 33397343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1584 4 123 Nodulin-like Gene Family AT5G40240 57.025 4.54e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1584 - - pvu:PHAVU_008G152800g 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1584 8 33395834 33397343 Pvu8g1584 8 33395834 33397343 ECH
Pvu2g0756 2 10491217 10495199 Pvu8g1584 8 33395834 33397343 ECH
Pvu9g1279 9 18460113 18463900 Pvu8g1584 8 33395834 33397343 ECH