Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1582 ATGGGAGTTCACGGTCTCTGGGAACTACTCTCCCCCGTCGGTCGCCGCGTCTCCGTCGAAACCCTCGCCGGGAAAACACTCGCCGTTGATGCGAGCATATGGATGGTGCAGTTTATGAAAGCGATGCGCGACGAGAAGGGCGAAGTGGTTCGCAACGCCCATTTGCTGGGCTTCTTCCGTCGCATTTGCAAGCTTCTCTTCCTCCGCACCAAACCGGTCTTCGTCTTCGACGGCGGGACCCCTGCCCTCAAGCGCCGCACCGTCGTTGCCCGCCGCCGCCAGCGCGAAAACGCCCAAGCCAAAGTCCGCAAAACTGCGGAGAAAATGCTGCTCAATCATTTGAAGACACTAAGGTTGAAGGAACTGGCTGATGATATTAAGAGCCAGAGGATGCAGACGAATAGTAATACTAAGGGTCAGAATAAATCTAATCAGAAGGACTTTGTTGGTAGTGATTCAAGAGGAAGTCACGTGAAAGAGCTAGATGAAATGTGTGCAGCTAAATATGCAACTGAGGAGAACATAAATTGTTCACAGGCAACAGTATCAACAAGTTACAACCAGGAGGAACTTGATGAAATGTTGGCAGCATCTATAGCTGCAGAGGAAAATGGAAAACATGCCGGAAAAGGAGTGCCTTCTATTGTAATTAATCCTTCAGAGGAAGAACATGATGCAGCAGAACAGATTCTACTGCCATCAGTAAATTCCGAAGTTGATATAGCTGTATTAGCTGCTTTGCCACAGTCTATGCAACTCGATATTCTTGCACAGCTAAAAGGAAAGAAAACAGAAGGGTTAGTAAAGGAAGCTTACAACCATGAAGAACCTGATGTCAATTACCGAGGCAAGGGTAAAGGGATTCTGCTCAGTGAAGCTGGCATGGCTGGTTGTAGCTCCAGACATGACAATGTTGCATCGAGGACTGACAATCAAGACTCAATTGACGAAATGTTGGCTGCATCTATTGCTCTGGAGGAAAATGACAAGTTAGTAAACAATGCATCAACTTCTGTTGCGGCTTCCACTGTCGAGGAAGAGGAAGTTGACTATGACGAAGATGAAGAGATGATACTGCCAGCTATGCATGGTGAAGTTGATCCACTTGTTCTAGCGTCATTACCTCCATCAATGCAACTGGACCTTCTTGTTCAGATGAGAGAGCGTTTGATTGCAGAGAACAGACAAAAGTATCAGAAAGTCAAGAAGGATCCCGCAAAATTCTCTGAGCTACAAATACAAGCTTACCTTAAAACTGTTGCTTTCAGACGCGAGATAAATGAAGTGCAGAAAGCTGCAGTTGGAGGAGGAGTAGAGGGTGTGCAGACTTCACGGATTGCATCTGAAGCCAACAGAGAATATATATTTTCGTCATCTTTTACTGGCGATAAACATGAACTTACCTCCACCAGCTTCGAGAAAAATAAAAGTACTCAACAGAAGGAACAGGGAGCACATCCTTCCCAGAATCTTGCAAATAGCATTGTGGCCGGAAATGGTTTTAATAAATCAAGTGAATTGGTTTGCAATGAACCTGGTGAGCCTGCTGAGGAAAGTATTCAGACATATCTTGATGAGAGGGGTCGATTTCGTGTCAGTAGATCGAGAGCAATGGGGATGCGTATGACCCGTGATATACAAAGAAATTTGGATTTGATGAAGGAGTTTGAGCAGGAAAAGGCACAAGTGAACAAGGCTTCAAATATTGGAACAATGAAAAATGTTGAAAATAAGGGTTCATCAGAAAGTTCTGGGATCCAGCTTGTTGGTAAATCACAAGAGGCGAATGTTGACTTAGTTCGAGAGAATGTGCAAAATGAACAAATTATGCTTGACCAGAATGCTTCTATAGATATATCTTTTGAATATGGATGCGAAAATAAGTTTGCAAACGGTGAAGATGATATATTTTCTAGTTTAGTAGGAGGAAATCCAGTGGCGATCTTTGGCACTAATGATACTGCAGCAACAGTGCAACCTTCTCATTCTGATTGGGAAGAAGGAATTGTTGAAGGTAAGAGTACTGTTTTTCCTGAACATGATAAGGTGGAATTGAAGTCTTCTGTTGCAGAGGAGGATAATAATAATGAAAGTGAAGTAGAATGGGAGGAAGGAGATTGTGATGGTGCTAACAGCAGCTTATTGTCAGAAAAATATGCATCTCGAGGGCAGTTGGAGGAGGAGTCCAATTTGCAAGAGGCAATAAGGAGAAGTCTTGAAATTGAAGTGGATGAAAAACGCAAATGTATGTCATTGGTAGATGGGCATTCAAATATGTATGAGAACAAATTGGATCATGATTTAGAACATGGTGATGACCCAATAGGTTTAAATGAAAACACTGGGTTCCGGAATAATAAAAATAATATGGAGGGATTCACTTTGTGTACGGAAGATGGTACTGAAAAAATCGAATTACATGAAATTGAAGATGGAGATAAAAAGGATGATTTTGTTTCTGTAAATAATGCACAAACTAACCATTTTCATGGAAGTTCGTCAAAGCCATCTGTGACTTTTAGTTCGAATAAAACTAAGATATTGATTGACACAACTTGCAGATGGGATAGTCAGTCTTGTTCTGAAGATTCAATTTCAGATACAAAGATAATGATGAAAGACCAGATCCCTGTGGTCGCAGAGAAGCTATTTGATAAACGTGATAATGGTAAAGTGTCTCTCAATCATAACAATACATCTGAGGCTGTTCCAGTTGGTGCAACTGAAGATGAGAAAAAGAACTATATTAATGAATCTGAACCATTTAGTAATTCTACTGACAATACCAAACCCACTATTCATTTGGTGGATTCATCCTTGAAAGAAGCAACAGAAGACCTTCTTATTGAGCCAAAATTTGCTTCAGATGACAATAATGGAAATTTCTTTGACAAAAGGAACAGGAGCCGTGGCAGTGATGTGTTTAATACCCCAGGGGATTTTCCTGCTCTAGCAACTGAGGTTAGCCTTGAGGAAGAAATTCAAATTCTTGGTCAAGAATATATTAACCTAGAGAATGAACAGCGGAAGCTAGAGCGGAATGCAGAATCTGTAAACAGTGAATTATTCACTGAATGTCAGGAACTACTGCAAATGTTTGGCTTGCCATATATTATTGCTCCAATGGAAGCAGAAGCTCAATGTGCTTATTTGGAACTTGAGAAACTAGTTGATGGGGTTGTGACCGATGACTCTGATGTCCTTTTATTTGGGGCACGCAGTGTTTACAAAAATATATTCGATGACCGCAAATATGTAGAGACATACTTCATGGAGGACATTGAAAAGGAGCTTGGACTGACCAGAGAAAAAATAATACGCATGGCTCTACTTCTTGGGAGTGATTATACTGAAGGTGTAAGTGGGATTGGCATTGTTAATGCTATTGAGGTTTTGAATGCATTTCCTGAGGAAGATGGCCTCCTGAAATTCCGTGAGTGGGTTGAGTCACCGGATCCCACCATCCTTGGAACGTTGGATGCAAAAAATGGATCAATTACCAGAAAGAAATGGTCAAAAGTTAAAGAAAAGATAAATTCCATAAATTGTGATGCTAAAGAGTCTACATCAGAGCAGAACCTCCCCTGTGCTCCGGAGCAAAATGAGTTGCCAGATTACATCCAAGAAACAAAGCAAACTTTCTTCAATAAGCATAGAAATATTAGCAAGAATTGGCACATTCCTTTTTCTTTTCCAAGTGAAACAGTTATATCTGCTTACTGTTCTCCACATGTTGATAAATCAACTGAGCCTTTCACATGGGGGAAGCCAGATCATCTTGTTCTTCGGAAATTTTGCTGGGAGAAATTTGGCTGGATTGGCCAGAAATCAGATGAATTGCTATTACCTGTGTTAAAGGAGTATAATAAACGTGAGACCCAATTACGGATGGAAGCATTTTACAGTTTTAATGAGAGATTTGCGAAAATCCGTAGCAAAAGAATTAAGAAGGCAGTAAAAGGAATAACTGGTAAGCAGCCTTCAGATTTGATAGATAATTCTGCAGAGTTGTCCAAGAATAGGACGATTGGGAGACAACCCGAGGATAGCACGTTAGAGATTTCAGGGGGAACAGACGAAAGTCTTGAAAGTAGAAGGAAGTCAAAAATAAAACAGTCAACGAAAAGGAAGAATGATACTGTTGCCAAGGAACAGTCAAAGAAAAAGAAAGTCAATGATGATCCATCTTCAGCACCTAGTACATCAGAGATGGAGAATTTAAAGCCAAGCACGCAGACAGAAGAACAGTGTGATGGTAAGGCATTAACTCGGAATACAAGTGGCCGAGGAAGACATAGAGGTATGGGAATAAAAAGAGGAAGGGACAAAGAGCATCTCAGTTTTGAATCCTCATCAACTAGCAGTGACATTGATGATCAGGGGCCAAGAGTGCATGTGGATAAGGTTCCAAAAGACGTGAGAAAGTCATTGAGATCTCGGAAACCTGTCAACTATTCATTTGAAGATCCTGAAGATGAAGATGCTGATGATGCATTTGACCAGAGTAATCAGACTGGTCCAATAGAAGAAAATTTATCTCAGATTCATGGTGCATCTGAAGATGGTGCAACATATTTTAGTGCAATGAATTTTCCTTTAAAGGATAACTTGCCACCAACCAGCTCTCTCAAGTCAGAAGGTTCGTTTCGCATGCATGCAGGTGAAACTAATCATCCTAGTACTGGCAATAATGACTCTTCTGATGTCTTTAAAATGGGAGGTGGATTCTGTTTAGATGATGGTGAGACAGACAAGCTGGATACAATTGATGATGTCAATACTTCCACAGTGGATTCTACTCCAGACTTTTCACAGTTTTCTGATTGTTTGGATGAATCTAACCGTGATAAAAATAGTTCAGATGTGTTATTTTCTGGCACTGAAAAGCCTGAAAATGGGATGGAAGGTGGAGGTGCCCATAATAAATTTGGTATAGAGCCAAATGACCTTGTAAATACTAGTAGTTATGATCATTCTGAAACCATTTTGAAACCAGAGAATGCTCATAACAATAGTGGAGCCTCCGCTGGAGCTTTTAGTGCTATGCCTTTTCTGAGGAAAAGAAGGAAAAAGTGA 5076 0.4094 MGVHGLWELLSPVGRRVSVETLAGKTLAVDASIWMVQFMKAMRDEKGEVVRNAHLLGFFRRICKLLFLRTKPVFVFDGGTPALKRRTVVARRRQRENAQAKVRKTAEKMLLNHLKTLRLKELADDIKSQRMQTNSNTKGQNKSNQKDFVGSDSRGSHVKELDEMCAAKYATEENINCSQATVSTSYNQEELDEMLAASIAAEENGKHAGKGVPSIVINPSEEEHDAAEQILLPSVNSEVDIAVLAALPQSMQLDILAQLKGKKTEGLVKEAYNHEEPDVNYRGKGKGILLSEAGMAGCSSRHDNVASRTDNQDSIDEMLAASIALEENDKLVNNASTSVAASTVEEEEVDYDEDEEMILPAMHGEVDPLVLASLPPSMQLDLLVQMRERLIAENRQKYQKVKKDPAKFSELQIQAYLKTVAFRREINEVQKAAVGGGVEGVQTSRIASEANREYIFSSSFTGDKHELTSTSFEKNKSTQQKEQGAHPSQNLANSIVAGNGFNKSSELVCNEPGEPAEESIQTYLDERGRFRVSRSRAMGMRMTRDIQRNLDLMKEFEQEKAQVNKASNIGTMKNVENKGSSESSGIQLVGKSQEANVDLVRENVQNEQIMLDQNASIDISFEYGCENKFANGEDDIFSSLVGGNPVAIFGTNDTAATVQPSHSDWEEGIVEGKSTVFPEHDKVELKSSVAEEDNNNESEVEWEEGDCDGANSSLLSEKYASRGQLEEESNLQEAIRRSLEIEVDEKRKCMSLVDGHSNMYENKLDHDLEHGDDPIGLNENTGFRNNKNNMEGFTLCTEDGTEKIELHEIEDGDKKDDFVSVNNAQTNHFHGSSSKPSVTFSSNKTKILIDTTCRWDSQSCSEDSISDTKIMMKDQIPVVAEKLFDKRDNGKVSLNHNNTSEAVPVGATEDEKKNYINESEPFSNSTDNTKPTIHLVDSSLKEATEDLLIEPKFASDDNNGNFFDKRNRSRGSDVFNTPGDFPALATEVSLEEEIQILGQEYINLENEQRKLERNAESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELEKLVDGVVTDDSDVLLFGARSVYKNIFDDRKYVETYFMEDIEKELGLTREKIIRMALLLGSDYTEGVSGIGIVNAIEVLNAFPEEDGLLKFREWVESPDPTILGTLDAKNGSITRKKWSKVKEKINSINCDAKESTSEQNLPCAPEQNELPDYIQETKQTFFNKHRNISKNWHIPFSFPSETVISAYCSPHVDKSTEPFTWGKPDHLVLRKFCWEKFGWIGQKSDELLLPVLKEYNKRETQLRMEAFYSFNERFAKIRSKRIKKAVKGITGKQPSDLIDNSAELSKNRTIGRQPEDSTLEISGGTDESLESRRKSKIKQSTKRKNDTVAKEQSKKKKVNDDPSSAPSTSEMENLKPSTQTEEQCDGKALTRNTSGRGRHRGMGIKRGRDKEHLSFESSSTSSDIDDQGPRVHVDKVPKDVRKSLRSRKPVNYSFEDPEDEDADDAFDQSNQTGPIEENLSQIHGASEDGATYFSAMNFPLKDNLPPTSSLKSEGSFRMHAGETNHPSTGNNDSSDVFKMGGGFCLDDGETDKLDTIDDVNTSTVDSTPDFSQFSDCLDESNRDKNSSDVLFSGTEKPENGMEGGGAHNKFGIEPNDLVNTSSYDHSETILKPENAHNNSGASAGAFSAMPFLRKRRKK* 1692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1582 1691 MobiDBLite consensus disorder prediction 1327 1358 - -
Pvu8g1582 1691 MobiDBLite consensus disorder prediction 1647 1677 - -
Pvu8g1582 1691 Gene3D - 982 1099 - -
Pvu8g1582 1691 MobiDBLite consensus disorder prediction 1395 1423 - -
Pvu8g1582 1691 Gene3D - 1100 1178 - -
Pvu8g1582 1691 ProSitePatterns XPG protein signature 1. 70 84 IPR019974 GO:0016788
Pvu8g1582 1691 SUPERFAMILY PIN domain-like 2 1115 IPR029060 -
Pvu8g1582 1691 Pfam XPG I-region 1034 1115 IPR006086 GO:0004518
Pvu8g1582 1691 MobiDBLite consensus disorder prediction 129 151 - -
Pvu8g1582 1691 CDD H3TH_XPG 1103 1247 - -
Pvu8g1582 1691 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 24 38 IPR006084 -
Pvu8g1582 1691 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 72 91 IPR006084 -
Pvu8g1582 1691 SMART xpgineu 1031 1100 IPR006086 GO:0004518
Pvu8g1582 1691 Pfam XPG N-terminal domain 1 97 IPR006085 GO:0004518
Pvu8g1582 1691 MobiDBLite consensus disorder prediction 1359 1394 - -
Pvu8g1582 1691 Gene3D - 1 181 - -
Pvu8g1582 1691 MobiDBLite consensus disorder prediction 688 708 - -
Pvu8g1582 1691 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS 1 262 - -
Pvu8g1582 1691 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS 300 1691 - -
Pvu8g1582 1691 SMART HhH_4 1102 1135 IPR008918 GO:0003677|GO:0003824
Pvu8g1582 1691 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED 1 262 - -
Pvu8g1582 1691 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED 300 1691 - -
Pvu8g1582 1691 Coils Coil 546 566 - -
Pvu8g1582 1691 ProSitePatterns XPG protein signature 2. 1034 1048 IPR019974 GO:0016788
Pvu8g1582 1691 MobiDBLite consensus disorder prediction 1583 1691 - -
Pvu8g1582 1691 MobiDBLite consensus disorder prediction 129 155 - -
Pvu8g1582 1691 Coils Coil 987 1021 - -
Pvu8g1582 1691 MobiDBLite consensus disorder prediction 1500 1520 - -
Pvu8g1582 1691 MobiDBLite consensus disorder prediction 1554 1568 - -
Pvu8g1582 1691 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 1100 1309 IPR036279 -
Pvu8g1582 1691 CDD PIN_XPG_RAD2 1017 1101 - -
Pvu8g1582 1691 MobiDBLite consensus disorder prediction 1592 1608 - -
Pvu8g1582 1691 MobiDBLite consensus disorder prediction 1460 1488 - -
Pvu8g1582 1691 SMART xpgn3 1 98 IPR006085 GO:0004518
Pvu8g1582 1691 PRINTS Xeroderma pigmentosum group G protein signature 2 19 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Pvu8g1582 1691 PRINTS Xeroderma pigmentosum group G protein signature 54 77 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Pvu8g1582 1691 PRINTS Xeroderma pigmentosum group G protein signature 96 118 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Pvu8g1582 1691 MobiDBLite consensus disorder prediction 1318 1568 - -
Pvu8g1582 1691 MobiDBLite consensus disorder prediction 466 489 - -
Pvu8g1582 1691 CDD PIN_XPG_RAD2 2 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1582 Pvu-Chr8 33347598 33359715 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1582 1025 1132 Core DNA Replication Machinery Family AT5G26680 36.937 8.07e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1582 K10846 - gmx:100820295 2534.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1582 8 33347598 33359715 Pvu8g1582 8 33347598 33359715 ECH