Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1581 ATGAAAAGAGTTTCTACATGGATATCATTTGCCACATTCCTTTTCCTCCTAAACATCACCAGTTGTGTAGAGTATGAGGTCAAGAGAACACTGATACAATTTCTGGCACAAGTCTCTGGCAATGATGCACGACAGAACTCCACTTTGGTATGGAAACAAGACTCTGATCCCTGCAAGGGCCCCTGGCAAGGTGTACACTGTGATTCTCAAAACATCTTCATAAAGAAGTTGCTACTTGATAAGCTCAATTTCTCTGGAACACTTGATCTTGCTATGCTTTGCAACTTCGAACCACTGGCTGCATCTCTCACCTACCTTAGCCTTGATGGCAACAAAATTAGTGGGGGAATAGCATCTGAGGTAGGAAATTGCAAACAACTCACTCGCCTGCACCTAAGTGGAAACCAACTTGCTGGAGACCTTCCTAGTTCGCTTGCTATGCTCAACAATTTGAAGAGACTGGACATTTCAAATAACCATTTTTCTGGATCTTTACCAAACTTGTCTAGGATCTCAGGGCTGAACATGTTCCTTGCACAGAACAATTACCTTGGAGGAACTATACCTGCTTTTGAGTTCTCTAATTTTGACCAATTCAATGTTTCCTTTAACAATTTCCGTGGCCACATTCCAAACGTGCATGGCTATTTCTCCGCTGACAGCTTTCTTGGTAATCCTGAACTATGTGGAGATCCACTACCAAAGAATTGCTCCGATCAGCCTATGCCTTTTAGTGAGGCTCAGACATCGGAAAAATCAACGGGTCCTTCTAAGGACCAGATTCTTATGTACTCGGGCTATGCTGCATTGGTTGCCATCATTGTCCTTTTCGTAGTCTTCAAGCTGTGTAGAAGAAAGAAGGGAGAGAATAAAATTGAAGCATTGAATAATGGGGTAGGTGCCAGTGGTGGTGTTGTTCAAAAGCCGATCAATGTTTCAAGTGAATACAAAACTGAGGTAAGCAGATCTGAGTTTTCAGTCCCTTCTGAAAGTGGGATGGTTTCACAATCACTTGTAGTTCTTTCAAGCCAAGTGGCAATTGAATTGAGATTGGAAGACTTGTTGGGGGCACCTGCAGAACTGATTGGAAGAGGAAAAAATGGAAGTCTTTACAAGGTGATGCTTCACAATGGGATAATGGTAGTTGTGAAAAGGATCAAGGATTGGACTATTTCAAGCCACGATTTCATACAAAGAATGCGAATACTTAGCCAAGCAAAGCACCCTCATGTCCTGGCACCACTTGCTTTCTATTGTTCTAAACAAGAGAAGCTTTTGGTGTATGAATATCAGCAGAATGGCAGTTTGTTCAAGCTTCTACATGGTACTACAAAAGCCTTAGACTGGAGCAGCAGACTTGGGATTGCAGCTACAATTGCTGAGGCATTAGCTTTCCTGCACCAAGAGCTAGGCCATCATGGTATAGTTCATGGTAATCTGAAATCCTCCAACATTTTGCTAAACAAGAATATGGAGGCATGCATAAGTGAATATGGTATTATGGATATGGATGATGAAAGAGGTTCACCTTTTGGCAGTTCTAGTGATGCTGGTGCATTAGATATGTTAAAAGGAGATGTTTATGGCTTTGGTGTGATTCTTCTTGAAGTTCTTACTGGTAAGTTAGTGAAGGGAAATGGGATTGACTTGACTGATTGGGTTCAGTCAGTTCTGAGGGAAGAATGGACAGGTGAAGTCTTTGACAAGTCCCTAATATCAGAGTATGCAAGCGAAGAGAGGATGGTGAATTTGCTTCAGGTGGCTATAAGATGTGTGAATCGTTCACCACAGGCTAGACCAACCATGAACCAAGTTGCACTCATGATTAACACTATCAAAGAGGACGAAGAAAAATCCTTGATCTATGAAGTCTGA 1875 0.4197 MKRVSTWISFATFLFLLNITSCVEYEVKRTLIQFLAQVSGNDARQNSTLVWKQDSDPCKGPWQGVHCDSQNIFIKKLLLDKLNFSGTLDLAMLCNFEPLAASLTYLSLDGNKISGGIASEVGNCKQLTRLHLSGNQLAGDLPSSLAMLNNLKRLDISNNHFSGSLPNLSRISGLNMFLAQNNYLGGTIPAFEFSNFDQFNVSFNNFRGHIPNVHGYFSADSFLGNPELCGDPLPKNCSDQPMPFSEAQTSEKSTGPSKDQILMYSGYAALVAIIVLFVVFKLCRRKKGENKIEALNNGVGASGGVVQKPINVSSEYKTEVSRSEFSVPSESGMVSQSLVVLSSQVAIELRLEDLLGAPAELIGRGKNGSLYKVMLHNGIMVVVKRIKDWTISSHDFIQRMRILSQAKHPHVLAPLAFYCSKQEKLLVYEYQQNGSLFKLLHGTTKALDWSSRLGIAATIAEALAFLHQELGHHGIVHGNLKSSNILLNKNMEACISEYGIMDMDDERGSPFGSSSDAGALDMLKGDVYGFGVILLEVLTGKLVKGNGIDLTDWVQSVLREEWTGEVFDKSLISEYASEERMVNLLQVAIRCVNRSPQARPTMNQVALMINTIKEDEEKSLIYEV* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1581 624 Gene3D Ribonuclease Inhibitor 196 240 IPR032675 -
Pvu8g1581 624 PANTHER OS10G0387400 PROTEIN 3 623 - -
Pvu8g1581 624 SUPERFAMILY Protein kinase-like (PK-like) 360 608 IPR011009 -
Pvu8g1581 624 Pfam Protein tyrosine and serine/threonine kinase 360 606 IPR001245 GO:0004672|GO:0006468
Pvu8g1581 624 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Pvu8g1581 624 Pfam Leucine Rich repeats (2 copies) 125 169 IPR025875 -
Pvu8g1581 624 ProSiteProfiles Protein kinase domain profile. 356 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1581 624 Gene3D Phosphorylase Kinase; domain 1 333 430 - -
Pvu8g1581 624 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Pvu8g1581 624 Gene3D Ribonuclease Inhibitor 26 195 IPR032675 -
Pvu8g1581 624 PANTHER OS05G0588300 PROTEIN 3 623 - -
Pvu8g1581 624 SUPERFAMILY L domain-like 48 215 - -
Pvu8g1581 624 Gene3D Transferase(Phosphotransferase) domain 1 432 623 - -
Pvu8g1581 624 ProSiteProfiles Leucine-rich repeat profile. 150 172 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1581 Pvu-Chr8 33338616 33340673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1581 10 613 Receptor kinase-like Gene Family AT3G08680 33.488 4.55e-87 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu8g1581 PK_Tyr_Ser-Thr 2.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1581 - - gmx:100813796 992.26