Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1576 ATGTATAGAATAATATCGACGCCGGCGTCTAAGTTCCGCCAATTCAGGCGACTCCGATCCCGACCGAAGACAACAACAGCGACAGACGAGGAGCACGCGTTTCAGATCCTATGGCGGCACCAGATACTGGACCCCGACAGCGACATCGTGGCGTATTGGAACAAGGTCTTCCTCGTGACAAGCCTCCTCGCCCTCTTCATCGACCCTCTCTACTTCTTCCTCCCCACCGTGGGTGGCCCCGCCTGCTTGCAGGCTGACCCCAGACTGAGCATTATCGTTACCATCCTCCGCTCCTTCGCTGACCTCTTCTACGTCCTCCACATGCTCATGAAGTTCCGCACCGCCTTCGTCGCTCCCAACTCTAGAATCTTCGGCCGTGGCGACCTCGTCATGGACTCCCGCGAAATTGCCATGCGTTACCTCAAGTCAGATTTCGTCATTGACCTCGCCGCCACCATCCCTCTCCCCCAGATTGTGATTTGGTTGGTGATTCCAGCGAGCTCAAACGCAAGAACTGACCATGCCAACAACACTCTTGCTCTTTTTGTTCTTATTCAATATGTTCCTAGGCTGTTTCTTATCTTTCCTTTGAACCAGCGTATTCAGAAAACCACTGGCGTTATTGCCAAGACTCCCTGGATTGGAGCCGCATACAATCTTGTTCTCTACATGCTAGCCAGCCATGTTACAGGAGCGACTTGGTATCTATCGTCAATAGGGAGGCAGTTTAACTGCTGGAAAACGCAGTGCCAAATAGAGAACAAATCACATACCCTCTCTTGCTTTTCAAGTTATCTTGATTGCAATAGTTTGGACCTCCCTGATAGGCAATACTGGCTAAACATCACCCGTGTAATCACCAAATGTGACGCCAAGAGCAAAATCAACATCAAATATAAATTTGGGATGTTCGCAGAGGCTTTCCTGGACGATGTTGTCACTTCCAATTTTAAGGAAAGATACTTCTACTGTCTTTGGTGGGGTTTGAGAAATCTAAGCTCATACGGACAGAACTTGGACACCACAACATATCTCCCTGAGACATTATTTTGCATCATCTTATGCATTGCTGGATTGGTTCTCTTTTCACTTTTGATTGGAAACATGGAGACGTACTTGTCATCAATGACAGTTAGACTTGAAGAATGGAGGATTCGGAAAAGAGATACAGAGGAGTGGATGAGGCATCGCCAGTTACCACCACATTTGCAGGAACGTGTCCGTCGTTTTGTTCAATATAAATGGCTTGCAACAAGAGGAGTTAATGAAGAAGCCATACTGCTTTCGTTACCTTTGGATATTCGTCGAGAAATTCAACACCACTTGTGTCTTTCTCTTGTGCGGCGTGTCCCCTTCTTCTCTCAAATGGATGATCAACTTCTTGATGCAATTTGTGAACGCCTTGCGTCATCACTAAGCACTGAAGGCACCTACATATTTCGAGAGGGTGATCCGGTGGATGAAATGTTGTTTATCATCAGAGGGCAATTGGAGAGCTCCACCACCAACGGAGGAAGGTCTGGATTCTTCAATTGCATCAAACTCCGGCCTGGTGACTTTTGTGGAGAGGAATTGCTGACATGGGCCTTAATGCCAAACTCAACCCTCAACTTACCTTCTTCTACTCGTACTGTCAAAGCTCTTTCTGAAGTTGAAGCTTTTTCACTACAAGCAGAGGATCTGAAAAGTGTGGCAAGTCAGTTCAAGCGCCTTCACAGCAAGAAACTTCAGCATGCGTTTAGGTATTATTCCCATCAATGGAGGACATGGGGTGCTTGCTTCATACAAGCTGCTTGGAGACGACATCAGAAAAGAAAGGCAACAAGGGAGTTATCCCTGAAAGAGGGTCTCTACTACCTGTCTTTCCCTGAGACGGATGAAAGTGGACTTTTGGAGGATTATGAAATCGGGCAATCCTCAAGGAATGCGAAAAAGGTTCAGAATCTTGGTGCAACTGTCTTGGCCTCAAGGTTTGCTGCCAATACAAGGAAAGGGACTCATAAGCTACCGGATCCTGTGCCCCAATTATTCAAGCCAGACGAACCTGATTTTTCTCTTGACCATGAACTTTAG 2073 0.4699 MYRIISTPASKFRQFRRLRSRPKTTTATDEEHAFQILWRHQILDPDSDIVAYWNKVFLVTSLLALFIDPLYFFLPTVGGPACLQADPRLSIIVTILRSFADLFYVLHMLMKFRTAFVAPNSRIFGRGDLVMDSREIAMRYLKSDFVIDLAATIPLPQIVIWLVIPASSNARTDHANNTLALFVLIQYVPRLFLIFPLNQRIQKTTGVIAKTPWIGAAYNLVLYMLASHVTGATWYLSSIGRQFNCWKTQCQIENKSHTLSCFSSYLDCNSLDLPDRQYWLNITRVITKCDAKSKINIKYKFGMFAEAFLDDVVTSNFKERYFYCLWWGLRNLSSYGQNLDTTTYLPETLFCIILCIAGLVLFSLLIGNMETYLSSMTVRLEEWRIRKRDTEEWMRHRQLPPHLQERVRRFVQYKWLATRGVNEEAILLSLPLDIRREIQHHLCLSLVRRVPFFSQMDDQLLDAICERLASSLSTEGTYIFREGDPVDEMLFIIRGQLESSTTNGGRSGFFNCIKLRPGDFCGEELLTWALMPNSTLNLPSSTRTVKALSEVEAFSLQAEDLKSVASQFKRLHSKKLQHAFRYYSHQWRTWGACFIQAAWRRHQKRKATRELSLKEGLYYLSFPETDESGLLEDYEIGQSSRNAKKVQNLGATVLASRFAANTRKGTHKLPDPVPQLFKPDEPDFSLDHEL* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1576 690 CDD CAP_ED 452 583 IPR000595 -
Pvu8g1576 690 Gene3D - 59 375 - -
Pvu8g1576 690 SUPERFAMILY Voltage-gated potassium channels 44 374 - -
Pvu8g1576 690 SMART cnmp_10 452 583 IPR000595 -
Pvu8g1576 690 MobiDBLite consensus disorder prediction 664 690 - -
Pvu8g1576 690 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 31 686 - -
Pvu8g1576 690 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 31 686 - -
Pvu8g1576 690 SUPERFAMILY cAMP-binding domain-like 382 577 IPR018490 -
Pvu8g1576 690 Gene3D Helix hairpin bin 376 443 - -
Pvu8g1576 690 ProSiteProfiles cAMP/cGMP binding motif profile. 452 582 IPR000595 -
Pvu8g1576 690 Pfam Cyclic nucleotide-binding domain 475 567 IPR000595 -
Pvu8g1576 690 Gene3D Jelly Rolls 450 570 IPR014710 -
Pvu8g1576 690 Pfam Ion transport protein 52 379 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1576 Pvu-Chr8 32927941 32931965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1576 10 689 Ion Channels AT5G14870 66.997 0.0 988
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1576 K05391 - gmx:100802812 1291.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1576 8 32927941 32931965 Pvu8g1576 8 32927941 32931965 ECH