Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1538 ATGGTCGTGGGTTCCTTCATACTAACTTCTAATACCAAGAGAAGGGCCACCTACAAATTTTCCACCGACATGGACACTGAAGCTGCTACCAAGATCAAGCTTGATGCATTGAAAGAAAGAGTTGGGCGAGAGATCTGTGTTTTTGAAACATTTGTTTCTTCATCATCAAATGCAGCATTATCCAATGAAGAGTTGACTGATGACTTCTATGAGTTTACTGCTGAAGATTATCATAGAATTTTGGCAGCTAAAAAGGAAGATAAATTCTTGAAAACTCGAAAAATCCGAGAAGCCGAAGAGGCAGCGCGTAGGTCAGAAATGACGAAGGCTATAATTAGAGTTCGATTCCCAGATAATCACACATTGGAGACTACCTTCCACCCATCAGAAACAGTCCAGAGTTTAATTGATGTCCTGACTAAAGTTATTGCACTGCCAGAGCAGCCATTCTATATATATACTACTCCGCCTAAAAAGATCATGAAAGACATGTCTCAGAATTTTTATGATGCTGGCTTTTGTCCTGGAGCCATTGTCTACTTCTCGTACCATGTCCCAAAAGGTAGCACTGGTCCTTACCTTGAAGAAGATATATTATCTTTGAAGGAACTGCATGCTGCTAATGGTCAAGGCCAACAATCTGAGCCTTTAGTACAGTCAGAACCGGAACCTGCAGTGGCAACACATCCTCCTGTTGAACAACGCAAACCTGCTGAGAAAAAGCTTGTTAAACCAAAGTGGTTAAAAATGTGA 753 0.4104 MVVGSFILTSNTKRRATYKFSTDMDTEAATKIKLDALKERVGREICVFETFVSSSSNAALSNEELTDDFYEFTAEDYHRILAAKKEDKFLKTRKIREAEEAARRSEMTKAIIRVRFPDNHTLETTFHPSETVQSLIDVLTKVIALPEQPFYIYTTPPKKIMKDMSQNFYDAGFCPGAIVYFSYHVPKGSTGPYLEEDILSLKELHAANGQGQQSEPLVQSEPEPAVATHPPVEQRKPAEKKLVKPKWLKM* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1538 250 Gene3D - 99 182 - -
Pvu8g1538 250 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1-RELATED 9 250 - -
Pvu8g1538 250 CDD UBX2_UBXN9 110 183 - -
Pvu8g1538 250 MobiDBLite consensus disorder prediction 233 250 - -
Pvu8g1538 250 Pfam UBX domain 108 177 IPR001012 GO:0005515
Pvu8g1538 250 MobiDBLite consensus disorder prediction 208 250 - -
Pvu8g1538 250 SUPERFAMILY Ubiquitin-like 84 181 IPR029071 -
Pvu8g1538 250 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 9 250 IPR044232 GO:0032984|GO:0051117
Pvu8g1538 250 ProSiteProfiles UBX domain profile. 105 181 IPR001012 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1538 39 138 C2H2 Transcription Factor Family AT2G01650 35.577 6.34e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1538 K15627 - gmx:100818386 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1538 8 30350261 30357003 Pvu8g1538 8 30350261 30357003 ECH