Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1514 ATGCTGTTCATATTTCCACCACTTCTGTCCATGAAGCTCCAACCTTTATGGCTGCTTCTTCTAATGTACTTTTGTGCATTTGCAGTGACCTCTTCTCATAATCATGATGCTGTTGCTTCTTCTGAAGCAAATGCTTTGTTGAAATGGAAAGCCAGCCTTGACAACAACAGTCAAGCTTCTCTCTCTTCATGGAATGGCAATAATCCTTGCAACTGGCTGGGGATTAAATGTGATGACTCCCATTCTGTTTCTGACATAAATCTTATACGTCTTGGATTAAAAGGTACACTTCAAACTTTTAACTTCTCATTACTTCCAAACATTCTCAATCTCAATATCAGTTACAACTCCTTGTCTGGAACTATTCCTCCACAAATTCAACACTTGTCCAATCTCAGTACACTTGATTTGTCTACCAATAAACTCTCTGGTGCCATTCCCAATACCATCTGTAATCTCTCCAAACTCAAATATCTGAATCTCAGTGTCAATGCTCTTTCTGGTCCTATTCCTAATGAAGTTGGCAATCTCCACTCTCTTCTCACATTCGATATATTTGCCAACAACCTCTCTGGACCAATCCCTCCTTCCTTAGGTACCTTGCCCCTTTTGAAATCCATTCACCTTTTTGAAAATAAGCTCAATGGATCCATTCCTTCCACTCTTGGAAATTTGACCAAGCTCACTTTGTTATCTTTATCATCAAATCAACTCACCGGATCCATTCCTCCCCATATTGGAAATTTAACAAACGCCAAGGTAATATGTTTTATTGGAAATGAACTTACTGGCGAGATTCCAATAGAAATGGAGAAGCTTACTGGTCTGGAATGTTTGCAACTAGCTGATAACAACTTTATAGGCCAAATACCTCAGAACATTTGCCTCGGTGGAAACATGAAATACTTCACTGCTGGTAATAACAATTTCACTGGCCCAATTCCTGAGACTTTGAGGAAATGCTACAGCCTTAAAAGACTCAGGCTTCAGCAAAACCATCTAACTGGGGATATAACAAACTTTTTTGATGTACTTCCAAACTTGAACTACATCGATCTGAGTGAAAATAATTTTCATGGTAATCTTTCACCTAGTTGGGGAAAATTCCGTAGCCTCACAAGCCTCATGATCTCCAACAATAATTTGTCAGGTGTTATTCCACCAGAACTAGGTGGGGCAACCAAATTACAGGTGCTTGATCTATCCTCAAACCATCTTACAGGAAACATACCAGAAGATTTATGCAAGTTGACCCTCTTGTTTGATCTTTCAATTAGCAATAATAGTCTTTCCGGAAATGTTCCCATGAAAATAGAATCACTGCAGGAACTTCAAATTTTGGAGCTTGGATCAAATGATTTCACAGGCTTAATCCAAAAACAACTTGGAAATTTGCACAATTTACACAACATGAGTCTGAGCCAGAATAAATTTGAGGGAAATATTCCTTCAGAGCTTGGCAATTTGAAATATCTCTCAAGTCTGGATCTCAGTGGAAATTTGTTGAGTGGAACATTACCACCGACGCTTGGTGGAATAAAGGGCTTAGAAGCATTGAATCTATCGCACAATAGCCTTTCAGGTGATCTCTCTAGCTTAGATGATATGATAAGCTTGACATCTTTTGATATATCATACAACCAGTTTGAGGGTCCACTTCCTAACAATCCAGTCTTCGAGAATGCTACAATTGCATCCTTGAGAGATAATAAAGGCCTGTGCGGCAATGTCACAGGCTTGGTCCCTTGCCCAACAGGAAGTGTGAAATCTCGTAATAATACGACAAGGAAAGTGCTAATAGCAGTTTTACCCCTTACTGTGGCCATTCTAATGCTTGGACTATTTCTTTTTGGTGTCTCTTATCATTTTTTCCGAACTTCAAACAAAGAACAAGACCAGGCTACAAGTTTACGATCTCCCAGCATATTGCCAATATGGAGTTTTGGTGGCAAAATTATGTTTGAGAATATTATTGAAGGCACAGAAAATTTTGACGACAAACATCTGATTGGAGTTGGAGGGCAAGGATGTGTTTACAAAGCAATTCTACCTACAGGTGAAGTTGTTGCTGTGAAGAAACTCCATTCAGTTCCAAATGAAGAAATGCTCAACATGAAAGCTTTCACAAGGGAGATCCAAACTTTGACAGAAATTCGACATCGAAACATTGTAAAGCTACATGGATTTTGTCCACATTCACAATATTCATTTTTGGTGTGTGAATTTCTAGAGAAGGGCGATCTGAAAAAGATTTTGAAGGATGACGAACAAGCCATTGCATTTGATTGGAAGAAAAGGGTGGATGTTATTAAAGGTGTAGCAGATGCTTTATGCTATATGCACCATGATTGCTCACCTCCAATTGTTCATCGTGATATATCAAGCAAGAATGTTCTTTTGGATTCGGAATATGTAGCTCATGTCTCAGACTTCGGTACAGCTAAGTTTCTAAATCATAATTCATCAAATTGGACCTCATTTGCAGGAACCTTTGGATATGCTGCCCCAGAACTTGCATACACAATGGAGGCAAATGAGAAGTGTGATGTGTATAGTTTTGGGGTGTTAGCATTGGAAATATTGTTTGGAAGGCATCCTGGTGATATTACATCTTCCTACATTGGTGTGAGCTCAACACTTGATGATATGGTATTGATGGATATGTTGGACGAACGTCTCCCAAATCCAACAAGCCATGTAATTAAGGATGTGGTATCAATTGTGAAGACAGCAATTTCTTGCTTGATTGAAAGCCCGCGATCTCGCCCTACCATGGACCAAGTTGTAAAGGAGCTTCTAACGTCAAACTCATCTTTTTTACAACATACGCACCTAGAGCAAAAAGACTGA 2850 0.3916 MLFIFPPLLSMKLQPLWLLLLMYFCAFAVTSSHNHDAVASSEANALLKWKASLDNNSQASLSSWNGNNPCNWLGIKCDDSHSVSDINLIRLGLKGTLQTFNFSLLPNILNLNISYNSLSGTIPPQIQHLSNLSTLDLSTNKLSGAIPNTICNLSKLKYLNLSVNALSGPIPNEVGNLHSLLTFDIFANNLSGPIPPSLGTLPLLKSIHLFENKLNGSIPSTLGNLTKLTLLSLSSNQLTGSIPPHIGNLTNAKVICFIGNELTGEIPIEMEKLTGLECLQLADNNFIGQIPQNICLGGNMKYFTAGNNNFTGPIPETLRKCYSLKRLRLQQNHLTGDITNFFDVLPNLNYIDLSENNFHGNLSPSWGKFRSLTSLMISNNNLSGVIPPELGGATKLQVLDLSSNHLTGNIPEDLCKLTLLFDLSISNNSLSGNVPMKIESLQELQILELGSNDFTGLIQKQLGNLHNLHNMSLSQNKFEGNIPSELGNLKYLSSLDLSGNLLSGTLPPTLGGIKGLEALNLSHNSLSGDLSSLDDMISLTSFDISYNQFEGPLPNNPVFENATIASLRDNKGLCGNVTGLVPCPTGSVKSRNNTTRKVLIAVLPLTVAILMLGLFLFGVSYHFFRTSNKEQDQATSLRSPSILPIWSFGGKIMFENIIEGTENFDDKHLIGVGGQGCVYKAILPTGEVVAVKKLHSVPNEEMLNMKAFTREIQTLTEIRHRNIVKLHGFCPHSQYSFLVCEFLEKGDLKKILKDDEQAIAFDWKKRVDVIKGVADALCYMHHDCSPPIVHRDISSKNVLLDSEYVAHVSDFGTAKFLNHNSSNWTSFAGTFGYAAPELAYTMEANEKCDVYSFGVLALEILFGRHPGDITSSYIGVSSTLDDMVLMDMLDERLPNPTSHVIKDVVSIVKTAISCLIESPRSRPTMDQVVKELLTSNSSFLQHTHLEQKD* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1514 949 Gene3D Ribonuclease Inhibitor 296 591 IPR032675 -
Pvu8g1514 949 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 9 168 - -
Pvu8g1514 949 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 156 938 - -
Pvu8g1514 949 Pfam Leucine rich repeat 370 430 IPR001611 GO:0005515
Pvu8g1514 949 Gene3D Transferase(Phosphotransferase) domain 1 743 948 - -
Pvu8g1514 949 SUPERFAMILY Protein kinase-like (PK-like) 642 932 IPR011009 -
Pvu8g1514 949 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 168 - -
Pvu8g1514 949 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 156 938 - -
Pvu8g1514 949 Gene3D Ribonuclease Inhibitor 40 191 IPR032675 -
Pvu8g1514 949 ProSitePatterns Tyrosine protein kinases specific active-site signature. 788 800 IPR008266 GO:0004672|GO:0006468
Pvu8g1514 949 Pfam Protein kinase domain 665 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1514 949 Gene3D Phosphorylase Kinase; domain 1 625 742 - -
Pvu8g1514 949 SMART LRR_sd22_2 225 251 - -
Pvu8g1514 949 SMART LRR_sd22_2 441 467 - -
Pvu8g1514 949 SMART LRR_sd22_2 489 518 - -
Pvu8g1514 949 SMART LRR_sd22_2 129 155 - -
Pvu8g1514 949 ProSiteProfiles Leucine-rich repeat profile. 395 418 IPR001611 GO:0005515
Pvu8g1514 949 SUPERFAMILY L domain-like 42 366 - -
Pvu8g1514 949 SMART LRR_typ_2 225 249 IPR003591 -
Pvu8g1514 949 SMART LRR_typ_2 489 513 IPR003591 -
Pvu8g1514 949 SMART LRR_typ_2 441 464 IPR003591 -
Pvu8g1514 949 SMART LRR_typ_2 273 297 IPR003591 -
Pvu8g1514 949 SMART LRR_typ_2 129 152 IPR003591 -
Pvu8g1514 949 SMART LRR_typ_2 153 177 IPR003591 -
Pvu8g1514 949 SMART LRR_typ_2 394 417 IPR003591 -
Pvu8g1514 949 SMART LRR_typ_2 369 393 IPR003591 -
Pvu8g1514 949 Gene3D Ribonuclease Inhibitor 192 295 IPR032675 -
Pvu8g1514 949 ProSiteProfiles Leucine-rich repeat profile. 515 537 IPR001611 GO:0005515
Pvu8g1514 949 ProSiteProfiles Protein kinase domain profile. 664 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1514 949 PRINTS Leucine-rich repeat signature 132 145 - -
Pvu8g1514 949 PRINTS Leucine-rich repeat signature 513 526 - -
Pvu8g1514 949 SUPERFAMILY L domain-like 290 566 - -
Pvu8g1514 949 Pfam Leucine rich repeat N-terminal domain 40 78 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1514 Pvu-Chr8 28427689 28431049 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1514 13 836 Receptor kinase-like Gene Family AT4G08850 40.451 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu8g1514 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1514 - - gmx:100809509 1401.34