Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1481 ATGAAGGCCGTGCCCCTACCCTTTCAGGAATTTAGAGGGAACGGGGTGTTAGATTTTGCTTCTGGTGGTGTTGCTGTTTCAGATTCGCTGTTACTCCCACAGCAAGAGCAATTTCTGCAAAGGTGGAATCCCCACAGGGAAAACTATTGCTATGTGGGCATTGACCCCACTTCTGGTTTGGACCTCAAAAGGAAAACAAGCCCTCCCACATCCTCCTCTACACTGTCTTCCTCACGCGCCAGCAGCGGCTGCGGTGGAGGCTGCGGCTCGACCGATAGCACCACCGGCGCTGGGGCAGCGAAGGTCTCGACTGAGAAGGAGAACAACCCACCTCAAGCAGGGTTAGAGGTTGGGCAGGGAAGATGTGGGCTGGGAATGGAGGATTGGGAGAGTGTGTTGTCTGAGTCATCAGGTCAAGATAATTCCATTTTGAAATTGATTATGGGAGACATTGAGGACCCTTCTGTGGGATTGACCAAGCTTTTGCAGGGTGGAAGCGCCTCTCAGGATGTTGAGTTCAATGGGGTTGGAGTCGGTTTTAGTTTGCTGGATCAAAGTTCTGTTCTCGATCCCATTCCCAGTGTCAACTTTATGACCACCATTCACCCTTCTGCTCCTGGGAATTGTTCCGACTTCCCTTTCAATTCCCACACTAACGTTAGCTCCAATATTTCCAGAGTTGCTTCTGGTGTGAATCTGCCAAACCCTGCCTTCCCTGATTCGGCTAGAAATCTCTCACCCGTTTCACTCCCTCAGGGTGTTCTTCACCCACATCAACAACACAATCCACCAATAGAGCCTCTGGATGAGAAGCTGCAAGTTCTCAATCCCCAGTTTTTTTTGAACCAAAATCAAACTCAGTTTATGGCAAACCCAGGTTCGGTTTTGCCTTTGACTTATGCTCAGTTGCAAGAACATCATCAGCTTCTCCCACAGCCTCCGGCCAAACGCCTCAATTGTGGCCCAAATTATCAGGTTCCTAAGGCACCCTTTTTGGACTCTGGCCAAGAGCTGTTACTACGGAGGCAGCAACAGCAGCTTCAACTGCTCCCTCACCATCTGCTTCAGAGGCCATCCATGGTGGTGGCCCCAAAGCAGAAAATGGCGAGCCCCAGCGGTGAAGATTTGGCAACCCACCAGCTTCAACAGGCTATAACTGAACAGCTTTTCAAGACTGCAGAGCTGATCGATGCCGGTAATCTGGAACTCGCGCACGGGATATTGGCGCGGCTCAATCACCAACTTTCCCCCTTTGGGAAGCCTTTTCAGAGGGCTGCTTTTTATTTCAAAGAGGCCTTGCAATTAGGACTTCATTCAAATGCCAACAACAGTTCTATGACCTTCTCACCCACTGGCCTTCTGCTCAAAATTGGTGCCTACAAATCATTCTCAGAAATCTCCCCAGTTCTGCAGTTCGCCAATTTCACTTGTAATCAAGCACTGCTTGAAGCTGTGGAAGGGTTTGATCGCATTCACATAATAGATTTTGATATTGGGTTTGGTGGGCAGTGGTCTTCTTTCATGCAAGAGTTAGCACTGAGAAATGGAGGTGCACCTGAACTCAGGATCACAGCATTTTTGTCACCCTCCCACCATGATGAAATTGAGCTCAGTTTCACTCAGGAGAATTTGAAGCAATATGCTGGCGAGATAAACATGTCCTTTGAGCTTGAGATTTTGAGCTTTGAGTCTTTAAATTCTGCTTCCTGGCCCCAGCCACTTCGTGATTGTGAAGCTGTAGTGGTTAACATGCCTATTGGCTCATTCTCAAGCTACCCATCATATCTTCCTTTGGCCCTTCGCTTTGTGAAGCAGCTCATGCCAAAAGTTGTGGTTACATTGGATAGAAGTTGTGATCGAACTGATGCACCATTTCCTCAGCATCTGATTTTTGCACTTCAATCTTATTCGGGGCTTCTTGAATCACTTGATGCCGTTAATGTTCACCCAGATGTCCTTCAGATGATTGAGAAGTATTATCTTCAACCAGCAATGGAGAAGCTTGTTTTGGGCCGACATGGTTTTCAGGAAAGAATACTTTCTTGGAAAAACCTTCTCATGTCATCTGGGTTTTCACCATTGGCCTTTAGTAACTTTACAGAATCTCAAGCAGAGTGTTTGGTGCAGAGGACTCCAGGTAAGGGATTCCATGTTGAGAAAAGACAATCTTCCCTGGTTCTTTGCTGGCAAAGGAAGGATCTCATCTCAGTTTCAACCTGGAGATGCTGA 2229 0.476 MKAVPLPFQEFRGNGVLDFASGGVAVSDSLLLPQQEQFLQRWNPHRENYCYVGIDPTSGLDLKRKTSPPTSSSTLSSSRASSGCGGGCGSTDSTTGAGAAKVSTEKENNPPQAGLEVGQGRCGLGMEDWESVLSESSGQDNSILKLIMGDIEDPSVGLTKLLQGGSASQDVEFNGVGVGFSLLDQSSVLDPIPSVNFMTTIHPSAPGNCSDFPFNSHTNVSSNISRVASGVNLPNPAFPDSARNLSPVSLPQGVLHPHQQHNPPIEPLDEKLQVLNPQFFLNQNQTQFMANPGSVLPLTYAQLQEHHQLLPQPPAKRLNCGPNYQVPKAPFLDSGQELLLRRQQQQLQLLPHHLLQRPSMVVAPKQKMASPSGEDLATHQLQQAITEQLFKTAELIDAGNLELAHGILARLNHQLSPFGKPFQRAAFYFKEALQLGLHSNANNSSMTFSPTGLLLKIGAYKSFSEISPVLQFANFTCNQALLEAVEGFDRIHIIDFDIGFGGQWSSFMQELALRNGGAPELRITAFLSPSHHDEIELSFTQENLKQYAGEINMSFELEILSFESLNSASWPQPLRDCEAVVVNMPIGSFSSYPSYLPLALRFVKQLMPKVVVTLDRSCDRTDAPFPQHLIFALQSYSGLLESLDAVNVHPDVLQMIEKYYLQPAMEKLVLGRHGFQERILSWKNLLMSSGFSPLAFSNFTESQAECLVQRTPGKGFHVEKRQSSLVLCWQRKDLISVSTWRC* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1481 742 MobiDBLite consensus disorder prediction 63 110 - -
Pvu8g1481 742 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 741 IPR005202 -
Pvu8g1481 742 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 8 741 - -
Pvu8g1481 742 MobiDBLite consensus disorder prediction 60 120 - -
Pvu8g1481 742 ProSiteProfiles GRAS family profile. 376 741 IPR005202 -
Pvu8g1481 742 Pfam GRAS domain family 386 741 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1481 Pvu-Chr8 26081402 26084421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1481 384 742 GRAS Transcription Factor Family AT4G00150 58.840 2.47e-139 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu8g1481 GRAS 2.3e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1481 - - gmx:100805945 1213.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1481 8 26081402 26084421 Pvu8g1481 8 26081402 26084421 ECH
Pvu8g1481 8 26081402 26084421 Pvu10g0755 10 20939461 20942539 PCT