Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1476 ACTGAATTGTCTTTAATTGTGGCTACCCTCCCCACCATTCCTCTCACCTTACCACATCCTTTCTTTCCTTCTCGCCTATTCTTTCTCGGTAACAGTAATATTTGTATCTTCAGCTGCCAGGCGCCGTTTCCTTTTACTCTCTCTTTCTCTCTCTTCCTTTTTCAAAATCCAGTTTTTACTTACTCTGATCATGCCTCCACTGCCTCACTCCTCTCCATAACCATCAACCACTCACTCAATTCTTTTTCCTTCCTCTCCACACCCAAATTCAAATTTCACTACCAAAAAAAATGCTTCAATTTATTCACCTTTCACTCACCTCGCTGCTCTCTTCTCTGGCCATTCCATTTTTATGCCTCTTTTCATCTTAATTCGCTTCACTCTCCTCACGCCAACACTCGTCAAAATTCAAATTGCCAAGGGAAAAAAATAATCATGTTCCTTTCTTCCTCGTCTCATGCTCCCCGTTGGCTTCAAGTCCTCCTCACCGAGAAGTTCTACAACGCTTGCATAATTCACGAGGAGGCAAAGAAGAATGAGAAGAACGTGTATTGCTTGGATTGTTGCATCAGTCTCTGCCCTCACTGTTTGTCCCCTCACCGCTCTCATAGACTCTTGCAGATTAGAAGATATGTGTATCATGATGTTATAAGGTTGGATGACGCTGCAAAATTAATTGACTGCACTTCAGTTCAATCTTACACAACCAACAGTGCAAAAGTGGTATTTTTAAACCAAAGGCCACAGACAAGGAACTTCAGAGGCTCCGGCAATTTCTGCAGCACCTGTGACAGAAGTCTGCAAGACCCATACCATTTCTGCTCCCTTTCTTGCAAGATTAATTATCTCGTCAGAACAACGGGTTCTCTCTCCGGTTACCTCTTCGAGTGCAACTACTTGCCCTTATCAGAATCTGGGCTCGACGATGGTCTGATGACCCCAGACTCGGTTCTCGAACCGGCCGGTTCGGCCCGAACCTCGTCAGGTTCAGGAGGGTATGGCGGGGCTGATTGCAGGACCACCCTGGCTTGCACTGCCACCACTGAGATTGTGAGGAAGAAGAGAACCGGCGGCTCTGGTTTCCGGCCACCGTGCAGACCGGCATGTTCGCCTGTGTCGGAAATCTCGGCGGGTCTGATGAACCGGAGGAAAGGGAACCCCCAGAGGTCCCCGCTGTATTGA 1182 0.4738 TELSLIVATLPTIPLTLPHPFFPSRLFFLGNSNICIFSCQAPFPFTLSFSLFLFQNPVFTYSDHASTASLLSITINHSLNSFSFLSTPKFKFHYQKKCFNLFTFHSPRCSLLWPFHFYASFHLNSLHSPHANTRQNSNCQGKKIIMFLSSSSHAPRWLQVLLTEKFYNACIIHEEAKKNEKNVYCLDCCISLCPHCLSPHRSHRLLQIRRYVYHDVIRLDDAAKLIDCTSVQSYTTNSAKVVFLNQRPQTRNFRGSGNFCSTCDRSLQDPYHFCSLSCKINYLVRTTGSLSGYLFECNYLPLSESGLDDGLMTPDSVLEPAGSARTSSGSGGYGGADCRTTLACTATTEIVRKKRTGGSGFRPPCRPACSPVSEISAGLMNRRKGNPQRSPLY* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1476 393 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 154 393 - -
Pvu8g1476 393 ProSiteProfiles Zinc finger B-box type profile. 165 208 IPR000315 GO:0008270
Pvu8g1476 393 PANTHER - 154 393 - -
Pvu8g1476 393 Pfam PLATZ transcription factor 209 280 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1476 Pvu-Chr8 25881620 25884017 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pvu8g1476 PLATZ 5.8e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1476 - - pvu:PHAVU_008G142900g 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1476 8 25881620 25884017 Pvu8g1476 8 25881620 25884017 ECH