Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu8g1467 | ATGCACTCTCTTCTCCTCAATCCCATTTTCCTTAATGTCTTATCCGCCTCCCTCCACTGTCTCTTATTGCTATCAGCTTCGCTGTCATGGCTTTGGAACAAAATGACATTCACGCCAGGAACCGGGGAAGAAGACTCTAAGGAGAAAGAGAAACCCAATGACAGTGAGACCCTCTTCAAAACGACCGTGTTTTGTTCTCTTGGTGTTTCTGCTTTCAGTTTCGTTCTCTGTTTCTTCAATTACTTCTATTGGTATGCTAGTGGGTGGTCAGAACAAAAGTTTATGACCCTTTTGGATTTGGCTCTCAAAACACTTGCTTGGGGTGTTGTTTGCGTTTCCTTGCACAAAGGGTTCTTCGTTTTTGGTTCCGGTGAAAGAAGCTTCAGGTTTTCACTCATCTTCAGAGTTTGGTGCGCCTTGTATCTCGTTTTTTCTTGTTATTCCTTCGTGGTGGATATTGTTGTTGTGACCAAGATACCTACTCAGTTATTGGTTTATGATGTTATGTCCACCTGTGCGGGGTTTTTGTTTTTTTACGTCGGGTACTTTGTGAAAAAAAAGGGTCACGTTAACGGTATCGAGGAACCTCTTTTGAATAATGATGCAAAAGAGACCAAGGGTGGGGACAATGTTACTCCTTTCTCCCATGCTGGAGTTTTTAGCATTCTCACTTTCGCTTGGGTGGGTTCTCTTGTGGCTGCTGGCTACAAAAAGACCTTGAACCTTGAGGATGTTCCTCTGCTAGACAACAAAGACAGTGTGGCTGGTGCTTTTCCTAGTTTCAGAGATAGACTTGAGGTTGATTATGGTGCAAATGCAATTAACAGTCTCACCACGCTTAAGCTGGTGAAGAGTTTAGTAATGTCAGCGTGGAAGGAAATTCTGTTCACAGCTTTTCTTGCATTGTTAAGCGCCTTGGCTTCTTATGTTGGTCCTTACCTTATTGAAGGTTTTGTTCAGTATCTTGATGGACAAAGACAGTATGAAAACCAGGGTTATGTTTTGGTTTCTGCCTTTTTCTTTGCAAAAATTGTGGAGTGCCTCTCTCAAAGGCATTGGTTCTTTAGGTTGCAGCAGATTGGACTTCGAATTCGAGCACTGCTTGTTGTGATGATCTACAATAAGGCTCTCACAGTTTCTTGTCAATCAAAGCTGGGCCACACTTCTGGGGAAATAATCAATTTCATGTCTGTTGATGCTGAAAGAGTTGGTGTCTTCAGTTGGTACATGCATGATTTGTGGATGGTGGCGTTGCAAGTCGCATTGGCCTTGTTGATTTTGTATAAAAACCTTGGCCTTGCTTCCGTTGCTGCTCTTGTTGCAACCATTGTTGTTATGTTGGCAAATGTTCCCTTGGGGTCATTACAAGAGAAGTTTCAAAATAAGTTGATGGAGTCAAAAGATATTAGAATGAAGGCCACATCCGAGATTTTGAGGAACATGAGGATCCTCAAACTACAAGGTTGGGAAATGAAGTTTCTATCAAAAATAACTGAGCTCAGGAAAACTGAGGAAGGCTGGTTAAAAAGCTTTGTTTATACCTCAGCCATGACCACATTTGTGTTTTGGGGTGCACCCACATTTGTATCTGTGGTTACTTTCGGCACTTGTATGTTTCTAGGGATACCCCTTGAAGCAGGAAAGATCTTGTCTGCACTTGCAACATTCCGGATTCTTCAAGAGCCAATATATAACCTTCCTGATACAATTTCTATGATAGCACAAACTAAAGTTTCTCTTGATAGGATTTCATCATTCCTTCGGCTTGATGACTTACCGTCTGATGTTGTTGAGAAGCTTCCCCAGGGAAGTTCTAATACAGCAATTGAAGTAATTGATGGAAACTTCTCTTGGGATTTATCTTCCCCTAACCCAACATTGCAAAATATAAACTTTCAAGTTTTTCTTGGGATGAGGGTTGCTGTTTGTGGTGCTGTTGGATCAGGCAAGTCTACTTTACTTTCTTGTGTATTGGGAGAGGTACCTAAGATATCAGGCGATCTTAAGGTTTGCGGAACAAAGGCCTATGTTGCTCAGTCTCCATGGATACAAAGCGGCAAGATAGAGGATAATATTTTGTTTGGTAAACCCATGGATAGGGAAAGGTATGAGAAGGTACTGGAAGCTTGTTCCTTGAAGAAGGACCTGGAGATTTTTTCTTTCGGTGATCAGACAATTATAGGAGAACGTGGAATAAATATGAGTGGTGGACAGAAACAAAGAATTCAAATTGCACGTGCTCTCTACCAAGATGCCGATATATATCTATTTGATGATCCCTTTAGTGCTGTGGATGCTCACACAGGCTCTCATCTGTTTAAGGAATGCTTGCTGGGTCATTTATGTTCAAAAACAGTGGTTTATGTCACTCATCAGGTGGAGTTCTTACCCACCGCTGACCTTATATTGGTCATGAAAGATGGGAGAATTACTCAATGTGGAAAGTATATTGATCTGCTTAATAGTGGTACTGATTTTATGGAACTTGTCGGTGCACACAGAAAAGCTCTATCTACTCTAGATTCATTGGATGGAGGGACAACATCTAATGAAATAAGTACCTTAAAAAAAGAAGAAAATGTCTGTGGCACACATGATTTTAAAGAGAAAGAGGTAAGCAAAGATGTGCAAAATGGGGAAACAGACAACAAAACTGAACCAAAAGGTCAGCTTGTTCAAGAAGAAGAAAGGGAGAAAGGTAAAGTTGGGTTTTTAGTCTATTGGAAGTATATCACAACGGCATATGGTGGAGCTATGGTACCTTTCATATTGTTGGCTCAGATTCTTTTTCAAGCTCTTCAAATAGGAAGCAATTATTGGATGGCTTGGGCCACTCCCATCTCAACACATGTGCAACCTCGTGTTGAAGGAATGACTCTTATAGGAGTCTATGTTAGTTTGGCTGTTGCAAGTTCTTTCTGTGTCCTTGTCAGAGCAATGCTTCTTGTCACAACAGGTTATAAGACAGCTACTATACTCTTCAATAAAATGCACTTCAGCGTTTTCCGTGCTCCAATGTTATTTTTTGATTCCACTCCAAGTGGCCGAGTACTTAACAGAGCTTCAACTGACCAAAGTGCAGTGGATACAGACATTCCTTATCAAATTGGCTCACTTGCCTTCTCAATGATCCAGCTTCTGGGAATTATAGCAGTGATGTCCCAGGTTGCATGGCAGGTTTTCATTGTCTTTATACCTGTAATAGCAGTCAGCATATGGTATCAGCAATATTATATACCATCAGCTCGAGAACTATCACGTTTAATTGGAGTCTGCAAAGCTCCAATCATTCAACACTTTGCTGAGACAATTTCTGGTACTTCAACCATCAGAAGCTATGACCAGCAGTCAAGATTTAGAGAGACAAATATGAAACTGACTGATGGATATTCTCGGCCAAACTTCAATATTGTTGGCGCCATGGAATGGTTGTGCTTCCGCTTAGATATGTTGTCTTCAGTCACATTTGCCTTTTCCTTATTAGTCTTAATATCTATTCCACCGGGAATCATTGATCCAGGCATTGCTGGTTTAGTTGTTACATATGGACTTAATTTGAACATGATACAAGCTTGGGTGATATGGAATCTGTGTAACATAGAGAACAAAATTATATCAGTAGAAAGAATACTTCAATATACTAGTATTCCTAGTGAGCCTCCCCTTGTTGTAGAAGAAACTCGCCCCAACCCTTCTTGGCCATCATATGGCGAGGTTGATATACAAGATTTGCAGGTTCGTTATGCTCCACATCTTCCTCTTGTGTTGCGTGGTCTAACATGTAAGTTTCGTGGAGGATGGAAAACTGGCATTGTTGGGAGAACAGGAAGTGGTAAATCCACTCTCATTCAAACACTTTTCCGAATTGTTGAGCCTACCTGTGGTCAGATCATGATTGACAACATCAACATCTCTTCAATTGGACTTCATGATTTGAGGTCTAAACTAAGCATTATTCCTCAGGATCCAACAATGTTCGAAGGAACTGTGAGAAATAATCTAGATCCTCTGGAAGAATACACTGATGAACAAATTTGGGAGGCCCTGGATAAGTGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTCGACTCCACAGTTAGTGAGAATGGTGAGAATTGGAGTATGGGTCAGAGGCAGTTGGTCTGCCTTGGCAGGGTGCTTCTTAAGAAAAGCAAGGTTTTGGTGCTTGATGAAGCCACTGCATCAGTAGATACAGCTACAGATAATTTGATTCAGCAGACTCTTAGGCAACATTTCTCTGACTCTACAGTCATTACCATTGCACATAGAATAACTTCTGTTGTTGACAGTGATATGGTTCTGCTTCTTAGCCAAGGACTTATTGAGGAGTATGACACCCCAACAACTTTGCTAGAGAACAAGTCCTCATCTTTTGCACAACTTGTTACAGAGTATACCATGCGGTCCAACTCCAATTTTCAGAAATTTGTGGATCACTGA | 4470 | 0.4103 | MHSLLLNPIFLNVLSASLHCLLLLSASLSWLWNKMTFTPGTGEEDSKEKEKPNDSETLFKTTVFCSLGVSAFSFVLCFFNYFYWYASGWSEQKFMTLLDLALKTLAWGVVCVSLHKGFFVFGSGERSFRFSLIFRVWCALYLVFSCYSFVVDIVVVTKIPTQLLVYDVMSTCAGFLFFYVGYFVKKKGHVNGIEEPLLNNDAKETKGGDNVTPFSHAGVFSILTFAWVGSLVAAGYKKTLNLEDVPLLDNKDSVAGAFPSFRDRLEVDYGANAINSLTTLKLVKSLVMSAWKEILFTAFLALLSALASYVGPYLIEGFVQYLDGQRQYENQGYVLVSAFFFAKIVECLSQRHWFFRLQQIGLRIRALLVVMIYNKALTVSCQSKLGHTSGEIINFMSVDAERVGVFSWYMHDLWMVALQVALALLILYKNLGLASVAALVATIVVMLANVPLGSLQEKFQNKLMESKDIRMKATSEILRNMRILKLQGWEMKFLSKITELRKTEEGWLKSFVYTSAMTTFVFWGAPTFVSVVTFGTCMFLGIPLEAGKILSALATFRILQEPIYNLPDTISMIAQTKVSLDRISSFLRLDDLPSDVVEKLPQGSSNTAIEVIDGNFSWDLSSPNPTLQNINFQVFLGMRVAVCGAVGSGKSTLLSCVLGEVPKISGDLKVCGTKAYVAQSPWIQSGKIEDNILFGKPMDRERYEKVLEACSLKKDLEIFSFGDQTIIGERGINMSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGHLCSKTVVYVTHQVEFLPTADLILVMKDGRITQCGKYIDLLNSGTDFMELVGAHRKALSTLDSLDGGTTSNEISTLKKEENVCGTHDFKEKEVSKDVQNGETDNKTEPKGQLVQEEEREKGKVGFLVYWKYITTAYGGAMVPFILLAQILFQALQIGSNYWMAWATPISTHVQPRVEGMTLIGVYVSLAVASSFCVLVRAMLLVTTGYKTATILFNKMHFSVFRAPMLFFDSTPSGRVLNRASTDQSAVDTDIPYQIGSLAFSMIQLLGIIAVMSQVAWQVFIVFIPVIAVSIWYQQYYIPSARELSRLIGVCKAPIIQHFAETISGTSTIRSYDQQSRFRETNMKLTDGYSRPNFNIVGAMEWLCFRLDMLSSVTFAFSLLVLISIPPGIIDPGIAGLVVTYGLNLNMIQAWVIWNLCNIENKIISVERILQYTSIPSEPPLVVEETRPNPSWPSYGEVDIQDLQVRYAPHLPLVLRGLTCKFRGGWKTGIVGRTGSGKSTLIQTLFRIVEPTCGQIMIDNINISSIGLHDLRSKLSIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSTVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVVDSDMVLLLSQGLIEEYDTPTTLLENKSSSFAQLVTEYTMRSNSNFQKFVDH* | 1490 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu8g1467 | 1489 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1239 | 1473 | IPR003439 | GO:0005524 | |
Pvu8g1467 | 1489 | Pfam | ABC transporter | 627 | 761 | IPR003439 | GO:0005524 | |
Pvu8g1467 | 1489 | Pfam | ABC transporter | 1257 | 1404 | IPR003439 | GO:0005524 | |
Pvu8g1467 | 1489 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 606 | 831 | IPR027417 | - | |
Pvu8g1467 | 1489 | MobiDBLite | consensus disorder prediction | 871 | 894 | - | - | |
Pvu8g1467 | 1489 | CDD | ABCC_MRP_domain2 | 1237 | 1457 | - | - | |
Pvu8g1467 | 1489 | Gene3D | - | 1222 | 1475 | IPR027417 | - | |
Pvu8g1467 | 1489 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 609 | 832 | IPR003439 | GO:0005524 | |
Pvu8g1467 | 1489 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 295 | 575 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Pvu8g1467 | 1489 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 922 | 1202 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Pvu8g1467 | 1489 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1231 | 1471 | IPR027417 | - | |
Pvu8g1467 | 1489 | SUPERFAMILY | ABC transporter transmembrane region | 285 | 595 | IPR036640 | GO:0005524|GO:0016021 | |
Pvu8g1467 | 1489 | SUPERFAMILY | ABC transporter transmembrane region | 920 | 1221 | IPR036640 | GO:0005524|GO:0016021 | |
Pvu8g1467 | 1489 | ProSitePatterns | ABC transporters family signature. | 734 | 748 | IPR017871 | GO:0005524 | |
Pvu8g1467 | 1489 | Pfam | ABC transporter transmembrane region | 295 | 562 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Pvu8g1467 | 1489 | Pfam | ABC transporter transmembrane region | 922 | 1162 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Pvu8g1467 | 1489 | Gene3D | - | 593 | 843 | IPR027417 | - | |
Pvu8g1467 | 1489 | Gene3D | ABC transporter type 1, transmembrane domain | 882 | 1220 | IPR036640 | GO:0005524|GO:0016021 | |
Pvu8g1467 | 1489 | Gene3D | ABC transporter type 1, transmembrane domain | 272 | 591 | IPR036640 | GO:0005524|GO:0016021 | |
Pvu8g1467 | 1489 | SMART | AAA_5 | 636 | 809 | IPR003593 | - | |
Pvu8g1467 | 1489 | SMART | AAA_5 | 1265 | 1458 | IPR003593 | - | |
Pvu8g1467 | 1489 | CDD | ABC_6TM_ABCC_D2 | 920 | 1214 | IPR044726 | GO:0140359 | |
Pvu8g1467 | 1489 | PANTHER | MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN | 102 | 1485 | - | - | |
Pvu8g1467 | 1489 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 102 | 1485 | - | - | |
Pvu8g1467 | 1489 | CDD | ABCC_MRP_domain1 | 609 | 809 | - | - | |
Pvu8g1467 | 1489 | CDD | ABC_6TM_ABCC_D1 | 309 | 583 | IPR044746 | GO:0140359 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu8g1467 | Pvu-Chr8 | 25478657 | 25484687 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu8g1467 | 619 | 849 | Calmodulin-binding Proteins | AT2G36910 | 28.458 | 2.75e-20 | 96.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu8g1467 | - | K05666 | gmx:100794567 | 2472.58 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pvu8g1467 | 8 | 25478657 | 25484687 | Pvu8g1467 | 8 | 25478657 | 25484687 | ECH | |
Pvu10g0421 | 10 | 5873509 | 5885268 | Pvu8g1467 | 8 | 25478657 | 25484687 | PCT |