Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1467 ATGCACTCTCTTCTCCTCAATCCCATTTTCCTTAATGTCTTATCCGCCTCCCTCCACTGTCTCTTATTGCTATCAGCTTCGCTGTCATGGCTTTGGAACAAAATGACATTCACGCCAGGAACCGGGGAAGAAGACTCTAAGGAGAAAGAGAAACCCAATGACAGTGAGACCCTCTTCAAAACGACCGTGTTTTGTTCTCTTGGTGTTTCTGCTTTCAGTTTCGTTCTCTGTTTCTTCAATTACTTCTATTGGTATGCTAGTGGGTGGTCAGAACAAAAGTTTATGACCCTTTTGGATTTGGCTCTCAAAACACTTGCTTGGGGTGTTGTTTGCGTTTCCTTGCACAAAGGGTTCTTCGTTTTTGGTTCCGGTGAAAGAAGCTTCAGGTTTTCACTCATCTTCAGAGTTTGGTGCGCCTTGTATCTCGTTTTTTCTTGTTATTCCTTCGTGGTGGATATTGTTGTTGTGACCAAGATACCTACTCAGTTATTGGTTTATGATGTTATGTCCACCTGTGCGGGGTTTTTGTTTTTTTACGTCGGGTACTTTGTGAAAAAAAAGGGTCACGTTAACGGTATCGAGGAACCTCTTTTGAATAATGATGCAAAAGAGACCAAGGGTGGGGACAATGTTACTCCTTTCTCCCATGCTGGAGTTTTTAGCATTCTCACTTTCGCTTGGGTGGGTTCTCTTGTGGCTGCTGGCTACAAAAAGACCTTGAACCTTGAGGATGTTCCTCTGCTAGACAACAAAGACAGTGTGGCTGGTGCTTTTCCTAGTTTCAGAGATAGACTTGAGGTTGATTATGGTGCAAATGCAATTAACAGTCTCACCACGCTTAAGCTGGTGAAGAGTTTAGTAATGTCAGCGTGGAAGGAAATTCTGTTCACAGCTTTTCTTGCATTGTTAAGCGCCTTGGCTTCTTATGTTGGTCCTTACCTTATTGAAGGTTTTGTTCAGTATCTTGATGGACAAAGACAGTATGAAAACCAGGGTTATGTTTTGGTTTCTGCCTTTTTCTTTGCAAAAATTGTGGAGTGCCTCTCTCAAAGGCATTGGTTCTTTAGGTTGCAGCAGATTGGACTTCGAATTCGAGCACTGCTTGTTGTGATGATCTACAATAAGGCTCTCACAGTTTCTTGTCAATCAAAGCTGGGCCACACTTCTGGGGAAATAATCAATTTCATGTCTGTTGATGCTGAAAGAGTTGGTGTCTTCAGTTGGTACATGCATGATTTGTGGATGGTGGCGTTGCAAGTCGCATTGGCCTTGTTGATTTTGTATAAAAACCTTGGCCTTGCTTCCGTTGCTGCTCTTGTTGCAACCATTGTTGTTATGTTGGCAAATGTTCCCTTGGGGTCATTACAAGAGAAGTTTCAAAATAAGTTGATGGAGTCAAAAGATATTAGAATGAAGGCCACATCCGAGATTTTGAGGAACATGAGGATCCTCAAACTACAAGGTTGGGAAATGAAGTTTCTATCAAAAATAACTGAGCTCAGGAAAACTGAGGAAGGCTGGTTAAAAAGCTTTGTTTATACCTCAGCCATGACCACATTTGTGTTTTGGGGTGCACCCACATTTGTATCTGTGGTTACTTTCGGCACTTGTATGTTTCTAGGGATACCCCTTGAAGCAGGAAAGATCTTGTCTGCACTTGCAACATTCCGGATTCTTCAAGAGCCAATATATAACCTTCCTGATACAATTTCTATGATAGCACAAACTAAAGTTTCTCTTGATAGGATTTCATCATTCCTTCGGCTTGATGACTTACCGTCTGATGTTGTTGAGAAGCTTCCCCAGGGAAGTTCTAATACAGCAATTGAAGTAATTGATGGAAACTTCTCTTGGGATTTATCTTCCCCTAACCCAACATTGCAAAATATAAACTTTCAAGTTTTTCTTGGGATGAGGGTTGCTGTTTGTGGTGCTGTTGGATCAGGCAAGTCTACTTTACTTTCTTGTGTATTGGGAGAGGTACCTAAGATATCAGGCGATCTTAAGGTTTGCGGAACAAAGGCCTATGTTGCTCAGTCTCCATGGATACAAAGCGGCAAGATAGAGGATAATATTTTGTTTGGTAAACCCATGGATAGGGAAAGGTATGAGAAGGTACTGGAAGCTTGTTCCTTGAAGAAGGACCTGGAGATTTTTTCTTTCGGTGATCAGACAATTATAGGAGAACGTGGAATAAATATGAGTGGTGGACAGAAACAAAGAATTCAAATTGCACGTGCTCTCTACCAAGATGCCGATATATATCTATTTGATGATCCCTTTAGTGCTGTGGATGCTCACACAGGCTCTCATCTGTTTAAGGAATGCTTGCTGGGTCATTTATGTTCAAAAACAGTGGTTTATGTCACTCATCAGGTGGAGTTCTTACCCACCGCTGACCTTATATTGGTCATGAAAGATGGGAGAATTACTCAATGTGGAAAGTATATTGATCTGCTTAATAGTGGTACTGATTTTATGGAACTTGTCGGTGCACACAGAAAAGCTCTATCTACTCTAGATTCATTGGATGGAGGGACAACATCTAATGAAATAAGTACCTTAAAAAAAGAAGAAAATGTCTGTGGCACACATGATTTTAAAGAGAAAGAGGTAAGCAAAGATGTGCAAAATGGGGAAACAGACAACAAAACTGAACCAAAAGGTCAGCTTGTTCAAGAAGAAGAAAGGGAGAAAGGTAAAGTTGGGTTTTTAGTCTATTGGAAGTATATCACAACGGCATATGGTGGAGCTATGGTACCTTTCATATTGTTGGCTCAGATTCTTTTTCAAGCTCTTCAAATAGGAAGCAATTATTGGATGGCTTGGGCCACTCCCATCTCAACACATGTGCAACCTCGTGTTGAAGGAATGACTCTTATAGGAGTCTATGTTAGTTTGGCTGTTGCAAGTTCTTTCTGTGTCCTTGTCAGAGCAATGCTTCTTGTCACAACAGGTTATAAGACAGCTACTATACTCTTCAATAAAATGCACTTCAGCGTTTTCCGTGCTCCAATGTTATTTTTTGATTCCACTCCAAGTGGCCGAGTACTTAACAGAGCTTCAACTGACCAAAGTGCAGTGGATACAGACATTCCTTATCAAATTGGCTCACTTGCCTTCTCAATGATCCAGCTTCTGGGAATTATAGCAGTGATGTCCCAGGTTGCATGGCAGGTTTTCATTGTCTTTATACCTGTAATAGCAGTCAGCATATGGTATCAGCAATATTATATACCATCAGCTCGAGAACTATCACGTTTAATTGGAGTCTGCAAAGCTCCAATCATTCAACACTTTGCTGAGACAATTTCTGGTACTTCAACCATCAGAAGCTATGACCAGCAGTCAAGATTTAGAGAGACAAATATGAAACTGACTGATGGATATTCTCGGCCAAACTTCAATATTGTTGGCGCCATGGAATGGTTGTGCTTCCGCTTAGATATGTTGTCTTCAGTCACATTTGCCTTTTCCTTATTAGTCTTAATATCTATTCCACCGGGAATCATTGATCCAGGCATTGCTGGTTTAGTTGTTACATATGGACTTAATTTGAACATGATACAAGCTTGGGTGATATGGAATCTGTGTAACATAGAGAACAAAATTATATCAGTAGAAAGAATACTTCAATATACTAGTATTCCTAGTGAGCCTCCCCTTGTTGTAGAAGAAACTCGCCCCAACCCTTCTTGGCCATCATATGGCGAGGTTGATATACAAGATTTGCAGGTTCGTTATGCTCCACATCTTCCTCTTGTGTTGCGTGGTCTAACATGTAAGTTTCGTGGAGGATGGAAAACTGGCATTGTTGGGAGAACAGGAAGTGGTAAATCCACTCTCATTCAAACACTTTTCCGAATTGTTGAGCCTACCTGTGGTCAGATCATGATTGACAACATCAACATCTCTTCAATTGGACTTCATGATTTGAGGTCTAAACTAAGCATTATTCCTCAGGATCCAACAATGTTCGAAGGAACTGTGAGAAATAATCTAGATCCTCTGGAAGAATACACTGATGAACAAATTTGGGAGGCCCTGGATAAGTGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTCGACTCCACAGTTAGTGAGAATGGTGAGAATTGGAGTATGGGTCAGAGGCAGTTGGTCTGCCTTGGCAGGGTGCTTCTTAAGAAAAGCAAGGTTTTGGTGCTTGATGAAGCCACTGCATCAGTAGATACAGCTACAGATAATTTGATTCAGCAGACTCTTAGGCAACATTTCTCTGACTCTACAGTCATTACCATTGCACATAGAATAACTTCTGTTGTTGACAGTGATATGGTTCTGCTTCTTAGCCAAGGACTTATTGAGGAGTATGACACCCCAACAACTTTGCTAGAGAACAAGTCCTCATCTTTTGCACAACTTGTTACAGAGTATACCATGCGGTCCAACTCCAATTTTCAGAAATTTGTGGATCACTGA 4470 0.4103 MHSLLLNPIFLNVLSASLHCLLLLSASLSWLWNKMTFTPGTGEEDSKEKEKPNDSETLFKTTVFCSLGVSAFSFVLCFFNYFYWYASGWSEQKFMTLLDLALKTLAWGVVCVSLHKGFFVFGSGERSFRFSLIFRVWCALYLVFSCYSFVVDIVVVTKIPTQLLVYDVMSTCAGFLFFYVGYFVKKKGHVNGIEEPLLNNDAKETKGGDNVTPFSHAGVFSILTFAWVGSLVAAGYKKTLNLEDVPLLDNKDSVAGAFPSFRDRLEVDYGANAINSLTTLKLVKSLVMSAWKEILFTAFLALLSALASYVGPYLIEGFVQYLDGQRQYENQGYVLVSAFFFAKIVECLSQRHWFFRLQQIGLRIRALLVVMIYNKALTVSCQSKLGHTSGEIINFMSVDAERVGVFSWYMHDLWMVALQVALALLILYKNLGLASVAALVATIVVMLANVPLGSLQEKFQNKLMESKDIRMKATSEILRNMRILKLQGWEMKFLSKITELRKTEEGWLKSFVYTSAMTTFVFWGAPTFVSVVTFGTCMFLGIPLEAGKILSALATFRILQEPIYNLPDTISMIAQTKVSLDRISSFLRLDDLPSDVVEKLPQGSSNTAIEVIDGNFSWDLSSPNPTLQNINFQVFLGMRVAVCGAVGSGKSTLLSCVLGEVPKISGDLKVCGTKAYVAQSPWIQSGKIEDNILFGKPMDRERYEKVLEACSLKKDLEIFSFGDQTIIGERGINMSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGHLCSKTVVYVTHQVEFLPTADLILVMKDGRITQCGKYIDLLNSGTDFMELVGAHRKALSTLDSLDGGTTSNEISTLKKEENVCGTHDFKEKEVSKDVQNGETDNKTEPKGQLVQEEEREKGKVGFLVYWKYITTAYGGAMVPFILLAQILFQALQIGSNYWMAWATPISTHVQPRVEGMTLIGVYVSLAVASSFCVLVRAMLLVTTGYKTATILFNKMHFSVFRAPMLFFDSTPSGRVLNRASTDQSAVDTDIPYQIGSLAFSMIQLLGIIAVMSQVAWQVFIVFIPVIAVSIWYQQYYIPSARELSRLIGVCKAPIIQHFAETISGTSTIRSYDQQSRFRETNMKLTDGYSRPNFNIVGAMEWLCFRLDMLSSVTFAFSLLVLISIPPGIIDPGIAGLVVTYGLNLNMIQAWVIWNLCNIENKIISVERILQYTSIPSEPPLVVEETRPNPSWPSYGEVDIQDLQVRYAPHLPLVLRGLTCKFRGGWKTGIVGRTGSGKSTLIQTLFRIVEPTCGQIMIDNINISSIGLHDLRSKLSIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSTVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVVDSDMVLLLSQGLIEEYDTPTTLLENKSSSFAQLVTEYTMRSNSNFQKFVDH* 1490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1467 1489 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1239 1473 IPR003439 GO:0005524
Pvu8g1467 1489 Pfam ABC transporter 627 761 IPR003439 GO:0005524
Pvu8g1467 1489 Pfam ABC transporter 1257 1404 IPR003439 GO:0005524
Pvu8g1467 1489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 606 831 IPR027417 -
Pvu8g1467 1489 MobiDBLite consensus disorder prediction 871 894 - -
Pvu8g1467 1489 CDD ABCC_MRP_domain2 1237 1457 - -
Pvu8g1467 1489 Gene3D - 1222 1475 IPR027417 -
Pvu8g1467 1489 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 609 832 IPR003439 GO:0005524
Pvu8g1467 1489 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 295 575 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu8g1467 1489 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 922 1202 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu8g1467 1489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1231 1471 IPR027417 -
Pvu8g1467 1489 SUPERFAMILY ABC transporter transmembrane region 285 595 IPR036640 GO:0005524|GO:0016021
Pvu8g1467 1489 SUPERFAMILY ABC transporter transmembrane region 920 1221 IPR036640 GO:0005524|GO:0016021
Pvu8g1467 1489 ProSitePatterns ABC transporters family signature. 734 748 IPR017871 GO:0005524
Pvu8g1467 1489 Pfam ABC transporter transmembrane region 295 562 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu8g1467 1489 Pfam ABC transporter transmembrane region 922 1162 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu8g1467 1489 Gene3D - 593 843 IPR027417 -
Pvu8g1467 1489 Gene3D ABC transporter type 1, transmembrane domain 882 1220 IPR036640 GO:0005524|GO:0016021
Pvu8g1467 1489 Gene3D ABC transporter type 1, transmembrane domain 272 591 IPR036640 GO:0005524|GO:0016021
Pvu8g1467 1489 SMART AAA_5 636 809 IPR003593 -
Pvu8g1467 1489 SMART AAA_5 1265 1458 IPR003593 -
Pvu8g1467 1489 CDD ABC_6TM_ABCC_D2 920 1214 IPR044726 GO:0140359
Pvu8g1467 1489 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 102 1485 - -
Pvu8g1467 1489 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 102 1485 - -
Pvu8g1467 1489 CDD ABCC_MRP_domain1 609 809 - -
Pvu8g1467 1489 CDD ABC_6TM_ABCC_D1 309 583 IPR044746 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1467 Pvu-Chr8 25478657 25484687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1467 619 849 Calmodulin-binding Proteins AT2G36910 28.458 2.75e-20 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1467 - K05666 gmx:100794567 2472.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1467 8 25478657 25484687 Pvu8g1467 8 25478657 25484687 ECH
Pvu10g0421 10 5873509 5885268 Pvu8g1467 8 25478657 25484687 PCT